Gene Ping_2912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2912 
Symbol 
ID4624435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3594752 
End bp3595900 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content45% 
IMG OID639798032 
ProductABC transporter binding protein inner membrane protein 
Protein accessionYP_944215 
Protein GI119946535 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.315274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGA AACAAATGAG GCGTTCCCCT TTAATGCTGG TGGTACACCT GAGTGTGTTA 
TTTCTGGTGC TGTTATGGAC ATTTCCCACT GCGGGATTAT TGATTTCCTC TTTCCGCGAT
AAAGACCAAC TGGCAGTGAG TGGTTGGTGG GAGGCACTGT CCTCCTCGGA GCAAAATTTA
ATTGGCAGAA CAGATGCACC AGATCAACAA GTTTTAGTTG ACGGTCAGTA TATTTTAGCG
GGAGAAATTG AGGATTTTAA TCCTAAGGAT GAAATTTTAC GCTTTGGTTG GACATCTCAG
GAGCCGGAAG CCTATTTGGC AGGAAGTATT GCTAAAATGC GCAATGGTAG TACCTTAACC
GTTGCAGGTG ATGGTCACTA TAGCATGGTA TCACCGATGC CTTTTACCGG CAGTCGTGGC
AACCGAATAT TTTACACCGC ATTAGCTTCG CCTAAGTTTA CCCTCGACAA TTATGATGAA
GTATTACACT CAGAGGGCAT TGGTCAGTCA TTTATTAACT CACTAACAGT CACCATACCG
GCCACTATTA TTCCGATTTT GATCGCAGCC TTTGCCGCCT ATGCACTATC TTGGATGCGT
TTACCCGGGC GGGGAATATT AATTGCTCTG GTGGTTGGTT TACTGGTTGT GCCCCTGCAG
ATGTCTTTGA TTCCACTGTT ACAACTCTAC AATACAATAG GAGGATACTT CGGCGTTAGC
GCAAAAAGCT ATCTCGGCAT TTGGCTTGCC CATACTGGAT TCGGCTTACC CTTGGCTATT
TATTTATTAA GAAATTACAT TTCAGGTCTC CCTAAAGAAA TCATTGAATC AGCGCGTGTT
GATGGTGCTA ATGACTTTGA TATTTTTGTT AAAATTATAC TGCCCCTGTC ATTTCCGGCG
CTTGCTTCCT TTGCCATTTT CCAATTTCTT TGGGTCTGGA ATGATCTCTT GGTTGCGACG
GTATTCCTTG GTAATGGCGA ACATGAATTG GTATTAACCG GACGCTTGAG GGAGTTATTG
GGATCAAGAG GAGGAAATTG GGAAATCTTA ACAGCATCCG CTTTTGTCTC CATTGCGGTG
CCGCTCACCG TATTTTTCAC GCTGCAACGC TACCTAGTGC GCGGATTGCT GACAGGCTCA
GTCAAATAA
 
Protein sequence
MSLKQMRRSP LMLVVHLSVL FLVLLWTFPT AGLLISSFRD KDQLAVSGWW EALSSSEQNL 
IGRTDAPDQQ VLVDGQYILA GEIEDFNPKD EILRFGWTSQ EPEAYLAGSI AKMRNGSTLT
VAGDGHYSMV SPMPFTGSRG NRIFYTALAS PKFTLDNYDE VLHSEGIGQS FINSLTVTIP
ATIIPILIAA FAAYALSWMR LPGRGILIAL VVGLLVVPLQ MSLIPLLQLY NTIGGYFGVS
AKSYLGIWLA HTGFGLPLAI YLLRNYISGL PKEIIESARV DGANDFDIFV KIILPLSFPA
LASFAIFQFL WVWNDLLVAT VFLGNGEHEL VLTGRLRELL GSRGGNWEIL TASAFVSIAV
PLTVFFTLQR YLVRGLLTGS VK