Gene Ping_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2903 
Symbol 
ID4625203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3583753 
End bp3584343 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content41% 
IMG OID639798023 
Producttranscriptional regulator of TetR family protein 
Protein accessionYP_944206 
Protein GI119946526 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.453644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.873941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAT CAGCAAAATT TGATCGCGCT GATGTTGTTG ACAAAGCCAC CAAGCTATAT 
TGGGAAAAAG GTTTTCATGG AACATCCATG CGCAACCTGC AAGATGTGGT TGATATGCGG
CCAGGCAGTA TCTATGCGAC CTTTGGAAAC AAAGAAAATT TATTTAAAGA AGCGTTGCAA
CACTACGCAC AAGTCAGTTT TTCTCATCTT TCGGCCTGCA AAAAAGCATC TTTATCACCC
CTTGAAGCAC TGAGAACTTT TGTTAAAAGT ATCCTTATGG ACACGGGTAA ATCAGTCCCT
AGCGGTATGT GCATGCTGGT TAAATCAGTT GCTGAACTGA CCGTTGAAAA TGCCGAACTG
TTGTTGGAAA CTAAACGATT ACTGAGCCTG ATAGAAAGCG AATTTGCAGT AATCTTCAAA
GAAGCGATTG AACAGGGGGA AATAAGTGTC TCTAAAGATC CAAACCATCT GGCTCAATAT
CTGCAAATTC AGATAATGGG GTTACGCACC TATGCGAGTG CTAATGATAA TGCCCAGACT
ATTGAAGCCC TTATTGATGA TGTTTTTGAC AGCAGCATGG TTCGCGGATA A
 
Protein sequence
MSKSAKFDRA DVVDKATKLY WEKGFHGTSM RNLQDVVDMR PGSIYATFGN KENLFKEALQ 
HYAQVSFSHL SACKKASLSP LEALRTFVKS ILMDTGKSVP SGMCMLVKSV AELTVENAEL
LLETKRLLSL IESEFAVIFK EAIEQGEISV SKDPNHLAQY LQIQIMGLRT YASANDNAQT
IEALIDDVFD SSMVRG