| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2782 |
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| Symbol | |
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| ID | 4627067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3422386 |
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| End bp | 3424569 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639797905 |
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| Product | pyruvate dehydrogenase complex, E1 beta subunit |
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| Protein accession | YP_944088 |
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| Protein GI | 119946408 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.653166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAAA CGGAAAAATT ATTAACAAAT GTTGAGTGGC TTAAAATCGA AGCCGATAGC
AAAGATATAA ATAAGATCGG TGCTAAAGAA AGCATAAAAA TATTCACTCA AACTCAGATT
ATTAGAACCT TTGAAGAAGA AATGATTAAG CTGGATAAGC TTGGTTTAGT ACATGGTCCT
TTACATACCA GTGTTGGTCA GGAGGGGGCG ATGGTCGCTG CATTATCCGT TATGCGGGAT
AGTGATATTG CCAACGGTTC ACATCGAGGA CATCATTTAT TTTTAGGGAA ATCATTAAAC
TATGTTCTTC CTGACGATTT TGACCCAAAA AATGATGACT ATGACGTAAA TATGGATGAG
CTCATTTATA AAACCATGTC TGAAATTTTA GGGCTGAGTG ATGGCTTTTC CGGTGGTCGT
GGGGGGTCAA TGCACTTGCG TTGGGAAGAG TCTGGTGTCA TTGGCACCAA TGCGATCGTT
GGTGGTGGTG TACCTACTGC ATTAGGCGCT GCATGGTCTA AGAAACGTTC AGGAAATCAA
GATATTGTAT TTACATCATT TGGTGATGGC TCTTGTCATA TTGGTAACGT TTTAGAGTCA
TTTAACTTAG CCTCTTTATA TGAATTACCG CTTTGTTTTT ATATCGAAAA TAATGGTTAT
GCGGTTTCGA CAACATTAGA AGAACAATCT AAAGATATTC GAATGTCGTC TAGAGGACAA
GGTTTTTCAA TCCCAGCCTA TAAAGTGGAT GGGCAGGATC CCTTCAGCGT GCGTACTGCT
ATGGAAATGG CAGAAAAACA CATGCGCGCA GGTAAGGGGC CATTTATTCT TGAAGTCGAT
GTCTATCGTC ACTTTCATCA TAGTGGTGGC ATTAAAGGCA GTGCTTTTGG CTATCGTTCC
AAAGATGAAG AAAAAAAAGA AACGGAGAGA GATGCATTAA ATTTCATACA AAAAATATTG
ATTGAAAAAT CATGGATCAC GCAAAATGAA ATTGATGTTA TAAAAAATAG AATTGAAGTG
ATGGTTCAGA AATCGGTCAA ACGCATTCTG ATAAAAGACA ATGATAAAAA TATAATCAAC
CCCGTGTTGT GGCCTAGTAC GACTACACGT GATGATGGTT TAAGAAGTGA TAAAAGTGAA
TTCGAGGGTG TTAAATACAC TGAATTTAAT GACTTCAATG GTGGGTTAGA AAATAAGAGA
TTCGTGGACG TCATTGCACA AAACATGGTC AGACGTTTTG AGGATGATGA TCGCTACTTT
GTTATTGGTG AAGATGTTCA TAAATTAAAA GGCGGCACTA ACGGCGCAAC AAAAGGAATT
CCTGAACGTT GGCCTGACCG TTGTGTACCA ACACCCATTG CTGAGCATGC TTTTGTCGGT
TTGAGTGGTG GTGTGGCTAT GCTTGGAGAG TATCGTCCGA TCGTAGAATT AATGTATCCT
GATTTTGGAC TTGTTGCGGC AGATCAGCTT TTTAATCAAA TTGCAAAAGC CCGCCATATG
TTTGGTAATA CGGTGAAAGT ACCCTTGGTA TTGCGCACTA AAATAGCAAT AGGAAGCGGC
TATGGTTCTC AACATTCAAT GGATCCTGCC GGTTTATTTG CGATGTGGCC AGGTTGGAGA
ATCGTTGTCC CTTCAACACC TTATGATTAT GTTGGATTAA TGAACTCGGC ATTAAAATGT
GAAGATCCCG TTCTGGTGAT TGAAACCGTG GAGCTTTATT CTAAAACCGG GTTGGCACCC
ACTGACAACT TCGATTACTT TATTGAGTTA GGCAAAGCTA AAGTGGTGAG AGAAGGTCAG
AAATTCACCG TGCTGACTTA TTTAAATATG ATTTCACTGG CTGAAAAAGC CTGCGAAAAT
TTAGGCATTG ATGCTGAAGT TATTGATTTA CGCAGCCTGG ATAGAGCGAG TTTGGACTGG
GATACGATTG GAGAGAGTAT CAAGAAAACC AATCATGTGA TCGTTCTTGA GCAAGGTAGT
CTGACCAATT CTTACGGGGC TATGTTATCC GATGAAATTC AGAAGCGCTA TTTTGATTAT
TTAGATCACC CTGTTAAACG TGTCTATGGT GGTGAGTCTT CACCTAATGT ATCTAAAGTC
TTGGAACGTT CAGCCTATGT TGGTTTGGAA GAGATTGAAA AGGCTTTTAC TGAATCAATG
AACGATAAGG GTATTAGGGG TTAA
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| Protein sequence | MPKTEKLLTN VEWLKIEADS KDINKIGAKE SIKIFTQTQI IRTFEEEMIK LDKLGLVHGP
LHTSVGQEGA MVAALSVMRD SDIANGSHRG HHLFLGKSLN YVLPDDFDPK NDDYDVNMDE
LIYKTMSEIL GLSDGFSGGR GGSMHLRWEE SGVIGTNAIV GGGVPTALGA AWSKKRSGNQ
DIVFTSFGDG SCHIGNVLES FNLASLYELP LCFYIENNGY AVSTTLEEQS KDIRMSSRGQ
GFSIPAYKVD GQDPFSVRTA MEMAEKHMRA GKGPFILEVD VYRHFHHSGG IKGSAFGYRS
KDEEKKETER DALNFIQKIL IEKSWITQNE IDVIKNRIEV MVQKSVKRIL IKDNDKNIIN
PVLWPSTTTR DDGLRSDKSE FEGVKYTEFN DFNGGLENKR FVDVIAQNMV RRFEDDDRYF
VIGEDVHKLK GGTNGATKGI PERWPDRCVP TPIAEHAFVG LSGGVAMLGE YRPIVELMYP
DFGLVAADQL FNQIAKARHM FGNTVKVPLV LRTKIAIGSG YGSQHSMDPA GLFAMWPGWR
IVVPSTPYDY VGLMNSALKC EDPVLVIETV ELYSKTGLAP TDNFDYFIEL GKAKVVREGQ
KFTVLTYLNM ISLAEKACEN LGIDAEVIDL RSLDRASLDW DTIGESIKKT NHVIVLEQGS
LTNSYGAMLS DEIQKRYFDY LDHPVKRVYG GESSPNVSKV LERSAYVGLE EIEKAFTESM
NDKGIRG
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