| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2729 |
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| Symbol | |
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| ID | 4626391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3346835 |
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| End bp | 3349735 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639797852 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_944038 |
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| Protein GI | 119946358 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0797455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA CAACGCTTCT CGATTTATTA AGTGACAGTA AAGAGTTTGC GACTCGTCAC
AATGGCTCCG GTGCAGCACA ACAAAAAAAG ATGCTGGAGA CTATCGGCGT GCAGAGCATT
GAGCAGCTAA TTGATCAAAC TGTACCAGCA GCCATTCGTC TGCCCGAGAA AATGAAGTTA
GCTGAGCCGC AAAGCGAATC CATGACGCTG GCATCGCTCA AAGCGATCGC TGAAAAAAAC
ATTGTTAACC GCAGTTTTAT TGGCCAGGGT TATTACAATA CGTTACTGCC TAACGTCATA
TTACGTAATG TCTTAGAAAA TCCCGGCTGG TACACAGCTT ACACTCCCTA TCAGCCGGAA
ATTTCCCAAG GCCGTTTAGA GTCGTTATTA AACTATCAGC AAATGGTGAT GGATTTAACC
GCAATGGAAA TAGCCAATGC GTCGTTGCTG GATGAGGCCA CTGCTGCCGC AGAATCAATG
ACCTTATGCA AACGTGCCGG TAAAAGCAAA AGTTTAGCTT TCTTTGTGGC CGATGGCATT
CACCCGCAAA CCGTAGACGT TGTACGCACC CGTGCTGAAT TCTTTGGTTA TGAGATTATT
AGCGGTTCAA TGGAAGATCT TGACAACCAT GATCTGTTTG GCGCACTGCT GCAATACCCC
AGCACCACGG GTAATATTCA AGATCTAACC GCAATCATTG AAAAAGCACA TGCTAAAAAG
ACTCTGGTTT CTGTCGCTTC CGACTTGTTA GCATTAACCC TGCTTAAAGC ACCCGGCGAA
ATGGGCGCAG ACATTGTTAT CGGCAGTGCG CAGCGTTTTG GTATACCAAT GGGATTTGGC
GGACCGCACG CCGGATTTAT GGCAACCAAA GAAAAATTCA AACGTACTAT GCCCGGCCGT
ATTATCGGTG TATCAAAAGA CAGCAAAGGC AAGCCGGCAT TACGTATGGC AATGCAAACC
CGTGAGCAGC ATATTCGCCG CGAAAAAGCG ACTTCAAATA TTTGTACCGC TCAGGCCCTG
CTAGCTAATA TGTCCGCTTT TTATGCGCTT TATCACGGCC CTGAAGGTCT GCGTAAAATA
GCGCGCCGTG TCCACCATTT AACCGCTATT CTAGTGGCGG GTTTACGCAG TGAAGGGTTT
GAATTAGCAA ACCAGCACTT CTTCGATACT ATTACCTTAA ATAGCAACGA GCACAGTAAA
GCGATTTACC ACAGAGCACT TGCAGAAGGC ATGAATTTAC GCAAATTCCC AACGCCCGAT
AATATGCCCG TGCAGCTTGG TATCAGCCTT GATGAAACAA CCACTATTAC CGATGTTGAA
GATTTATTAC GTGTTATTAC CGGTAAAGCA CTTTCATCTG CAGGTTTTGC AGCCCAGGTA
GCAGAAGATG AGTTTGCCGG TATTCCGGCC ACATGTCGCC GCAGGAGTAA ATACTTAACC
CATCCGATAT TTAATGAGCA CCACAGTGAA ACGCAAATGA TGCGTTACAT GAAAAAATTA
GAGAATAAAG ATTATTCGCT GACCCATGGC ATGATCCCGC TCGGATGTTG TACCATGAAA
CTTAATGCGG CAGCGTTAAT GCTGCCCGTC AGCTGGCCTG AATTTTCACA AATGCACCCC
TTCGCACCGA CCGAGCAGAG CTTTGGTTAT CAGGAGCTGG CTGAAAAATT ATCCAAAATG
CTTTGTGAAG TAACAGGTTA CGATGGTTTC TCACTGCAGC CTAATTCCGG TGCACAGGGG
GAATATGCAG GTCTTATCGC AATTCACCGT TACCACCAAA GTAACGGTGA AGATCAGCGA
AACATCTGTT TGATACCCAG CTCAGCGCAC GGCACTAACC CCGCTACCGC ATCAATGCTG
TCCATGAAAG TAGTAGTTGT AGGCTGTGAT CAACAAGGTA ATATCGACCA CGCAGACTTA
AAAGCTAAAA TTGATAAGCA CCGAGATAAC CTCTCCTGCA TTATGGTCAC CTACCCCTCT
ACACATGGTA TTTATGAAGA AGGGATTCAG GAAATATGTG AATGGGTACA TGAAGCCGGT
GGTCAAGTCT ACCTTGATGG CGCAAATATG AATGCTCAGA TAGGTCTTAC CAGCCCAGGC
TTTATCGGCT CCGACGTATC CCATCTTAAC CTCCATAAAA CCTTCTGCAT ACCGCATGGT
GGCGGTGGTC CAGGTATGGG TCCGATTGGT GTCAAAAAAC ATCTTATTCC GTTCCTGCCG
GGACATATCG AAGTCACCGA ATCTGCAGAT AATAAACATT ATGCCGTTTC TGCGGCCGAG
TTAGGCTCCG CTTCTATTCT GCCTATCTCC TATGCCTATA TTGCCATGAT GGGTGAACAG
GGGTTAACCT CAGCGACCCA GATCGCTATC TTAAATGCGA ACTACATAAT GGAGCGTTTA
CGTCCGCATT ACCCGATTTT ATACCAGGGT AAAGAGGGCC GCGTTGCGCA CGAATGTATT
ATCGATATTC GCCCGCTTGA AGCAGCATCG GGTATTTCCA ATGAAGACAT CGCTAAACGT
CTGATGGATT ATGGCTTCCA TGCGCCGACT ATGTCCTTCC CGGTGGGAGG TACCTTTATG
ATTGAACCGA CTGAATCAGA AAGCACCGCT GAACTGGACA GATTCTGTGA TGCCATGATA
GCTATCCGCC ACGAAATCAA GCAGATAGAA GATGGTGAAT GGTCTGCAAC GGATAATCCG
CTGGTCAATG CTCCCCATAC ACAGGTTGAT TTAATGGAGT CCGAGTGGAC CCATGGTTAC
AGCCGTGAGC TGGCCTGTTT CCCATCAAAG CACAGTAAAG ACAGTAAGTA CTGGCCGACA
GTAAACCGTG TTGATAACGT ATTTGGTGAC CGTAACCTGA TTTGCTCATG TCCAAGTATT
GAAAGTTATA TGGAAGAATA A
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| Protein sequence | MTDTTLLDLL SDSKEFATRH NGSGAAQQKK MLETIGVQSI EQLIDQTVPA AIRLPEKMKL
AEPQSESMTL ASLKAIAEKN IVNRSFIGQG YYNTLLPNVI LRNVLENPGW YTAYTPYQPE
ISQGRLESLL NYQQMVMDLT AMEIANASLL DEATAAAESM TLCKRAGKSK SLAFFVADGI
HPQTVDVVRT RAEFFGYEII SGSMEDLDNH DLFGALLQYP STTGNIQDLT AIIEKAHAKK
TLVSVASDLL ALTLLKAPGE MGADIVIGSA QRFGIPMGFG GPHAGFMATK EKFKRTMPGR
IIGVSKDSKG KPALRMAMQT REQHIRREKA TSNICTAQAL LANMSAFYAL YHGPEGLRKI
ARRVHHLTAI LVAGLRSEGF ELANQHFFDT ITLNSNEHSK AIYHRALAEG MNLRKFPTPD
NMPVQLGISL DETTTITDVE DLLRVITGKA LSSAGFAAQV AEDEFAGIPA TCRRRSKYLT
HPIFNEHHSE TQMMRYMKKL ENKDYSLTHG MIPLGCCTMK LNAAALMLPV SWPEFSQMHP
FAPTEQSFGY QELAEKLSKM LCEVTGYDGF SLQPNSGAQG EYAGLIAIHR YHQSNGEDQR
NICLIPSSAH GTNPATASML SMKVVVVGCD QQGNIDHADL KAKIDKHRDN LSCIMVTYPS
THGIYEEGIQ EICEWVHEAG GQVYLDGANM NAQIGLTSPG FIGSDVSHLN LHKTFCIPHG
GGGPGMGPIG VKKHLIPFLP GHIEVTESAD NKHYAVSAAE LGSASILPIS YAYIAMMGEQ
GLTSATQIAI LNANYIMERL RPHYPILYQG KEGRVAHECI IDIRPLEAAS GISNEDIAKR
LMDYGFHAPT MSFPVGGTFM IEPTESESTA ELDRFCDAMI AIRHEIKQIE DGEWSATDNP
LVNAPHTQVD LMESEWTHGY SRELACFPSK HSKDSKYWPT VNRVDNVFGD RNLICSCPSI
ESYMEE
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