Gene Ping_2649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2649 
Symbol 
ID4624377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3248738 
End bp3249907 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content39% 
IMG OID639797777 
Productmajor facilitator transporter 
Protein accessionYP_943964 
Protein GI119946284 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.189084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAAAAA CGCTTCTAGA TAGAAATAAT AATATCGCCA TTCTTTTTGC TGGAATATTA 
ACCATTGTTG TTGGGCTAGG TGTTGCCAGA TTTGCATTTA CATCTCTGTT ACCTTTTATG
TTGGATGATT TTTTAACCCT TACCTATGCG GGTATCTTGG CCTCCTTAAA CTTTGCAGGT
TATCTCGCGG GCGCTGTTTT TTCTGTTTTT ATAAAGGATA TTAATACAAA AGTAAAATAC
TTTAGAATTG GCATGGTGCT GAGTGTGTTG ACTACTTTCG TTTTAGCGAC AACGGTAAAT
GAAACCTTGT GGCTAATATC AAGAGTGATT GCAGGATTTG GTTCGGCCAT GCTTATTATA
GTCGGCACAG CCATTGTAAT GGTAAAGCTA AATTTTGAAG ATAAAACCAA AGCAATGGGG
ATTCATTTCA GCGGTATCGG CGTTGCAATA GTTGTAAATG ATTTAATAAG CCGTTATGTG
CTGCAGAACG GAACCTGGAG TGATGCCTGG CTGGTGCTTA GCCTATTCGC TTTTATTATC
TCTTTTTACT CTATGTATAT TCTCTCTTTT GACAAAGAAC TTAAGCAAGA GGCTGTAAAA
CATAAACTTT CGATGTCAAT TTTTTCTCCT TATGTCGTAC TGCTTCTTTT TGCTTATTTT
ACCGAGGGTG TCGGTTTTGT TATTCAGGGA ACATTTTTGC CTGATATTAT AAACTCCCTT
GAAGGGCTTG ATGGTTATGG CAGTTTGGGA TGGCTCTTAG TCGGCATTGC AGGCATTCCC
TCTTCTATAA TATGGATGAG GTTAGCGCAT AATTATGGCA GTATAAATAT TATCATTGTT
GCGATGTCTA TTCAGCTGGT CGGTATTCTT ATTCCGGCAT TGAGTAATAA TATGTATTTA
AACTTGCTCA GTGGTGTTTT ATACGGGGGG ACTTTTATAG GGCTTGTTGC TCTATTTATG
AATCTTGGCG GTCAGCTAGC GGGCAAAAAT CCGGTTGTGC TAATGGGCGC GATGACGGCA
ACTTATGGTG TAGGGCAGGT AACTGGCCCT CTTTATAGCG TCACCCTGAT TGAATATTTT
GGAAATTATG ACACGACTTT GTATTTAACC GCATTAATAG TTTTTACAGG AATAGTGCTT
TTAGTTTATG CAAAAAAGAG AGAGGTTTAG
 
Protein sequence
MRKTLLDRNN NIAILFAGIL TIVVGLGVAR FAFTSLLPFM LDDFLTLTYA GILASLNFAG 
YLAGAVFSVF IKDINTKVKY FRIGMVLSVL TTFVLATTVN ETLWLISRVI AGFGSAMLII
VGTAIVMVKL NFEDKTKAMG IHFSGIGVAI VVNDLISRYV LQNGTWSDAW LVLSLFAFII
SFYSMYILSF DKELKQEAVK HKLSMSIFSP YVVLLLFAYF TEGVGFVIQG TFLPDIINSL
EGLDGYGSLG WLLVGIAGIP SSIIWMRLAH NYGSINIIIV AMSIQLVGIL IPALSNNMYL
NLLSGVLYGG TFIGLVALFM NLGGQLAGKN PVVLMGAMTA TYGVGQVTGP LYSVTLIEYF
GNYDTTLYLT ALIVFTGIVL LVYAKKREV