Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2649 |
Symbol | |
ID | 4624377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3248738 |
End bp | 3249907 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639797777 |
Product | major facilitator transporter |
Protein accession | YP_943964 |
Protein GI | 119946284 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.189084 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGAAAAA CGCTTCTAGA TAGAAATAAT AATATCGCCA TTCTTTTTGC TGGAATATTA ACCATTGTTG TTGGGCTAGG TGTTGCCAGA TTTGCATTTA CATCTCTGTT ACCTTTTATG TTGGATGATT TTTTAACCCT TACCTATGCG GGTATCTTGG CCTCCTTAAA CTTTGCAGGT TATCTCGCGG GCGCTGTTTT TTCTGTTTTT ATAAAGGATA TTAATACAAA AGTAAAATAC TTTAGAATTG GCATGGTGCT GAGTGTGTTG ACTACTTTCG TTTTAGCGAC AACGGTAAAT GAAACCTTGT GGCTAATATC AAGAGTGATT GCAGGATTTG GTTCGGCCAT GCTTATTATA GTCGGCACAG CCATTGTAAT GGTAAAGCTA AATTTTGAAG ATAAAACCAA AGCAATGGGG ATTCATTTCA GCGGTATCGG CGTTGCAATA GTTGTAAATG ATTTAATAAG CCGTTATGTG CTGCAGAACG GAACCTGGAG TGATGCCTGG CTGGTGCTTA GCCTATTCGC TTTTATTATC TCTTTTTACT CTATGTATAT TCTCTCTTTT GACAAAGAAC TTAAGCAAGA GGCTGTAAAA CATAAACTTT CGATGTCAAT TTTTTCTCCT TATGTCGTAC TGCTTCTTTT TGCTTATTTT ACCGAGGGTG TCGGTTTTGT TATTCAGGGA ACATTTTTGC CTGATATTAT AAACTCCCTT GAAGGGCTTG ATGGTTATGG CAGTTTGGGA TGGCTCTTAG TCGGCATTGC AGGCATTCCC TCTTCTATAA TATGGATGAG GTTAGCGCAT AATTATGGCA GTATAAATAT TATCATTGTT GCGATGTCTA TTCAGCTGGT CGGTATTCTT ATTCCGGCAT TGAGTAATAA TATGTATTTA AACTTGCTCA GTGGTGTTTT ATACGGGGGG ACTTTTATAG GGCTTGTTGC TCTATTTATG AATCTTGGCG GTCAGCTAGC GGGCAAAAAT CCGGTTGTGC TAATGGGCGC GATGACGGCA ACTTATGGTG TAGGGCAGGT AACTGGCCCT CTTTATAGCG TCACCCTGAT TGAATATTTT GGAAATTATG ACACGACTTT GTATTTAACC GCATTAATAG TTTTTACAGG AATAGTGCTT TTAGTTTATG CAAAAAAGAG AGAGGTTTAG
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Protein sequence | MRKTLLDRNN NIAILFAGIL TIVVGLGVAR FAFTSLLPFM LDDFLTLTYA GILASLNFAG YLAGAVFSVF IKDINTKVKY FRIGMVLSVL TTFVLATTVN ETLWLISRVI AGFGSAMLII VGTAIVMVKL NFEDKTKAMG IHFSGIGVAI VVNDLISRYV LQNGTWSDAW LVLSLFAFII SFYSMYILSF DKELKQEAVK HKLSMSIFSP YVVLLLFAYF TEGVGFVIQG TFLPDIINSL EGLDGYGSLG WLLVGIAGIP SSIIWMRLAH NYGSINIIIV AMSIQLVGIL IPALSNNMYL NLLSGVLYGG TFIGLVALFM NLGGQLAGKN PVVLMGAMTA TYGVGQVTGP LYSVTLIEYF GNYDTTLYLT ALIVFTGIVL LVYAKKREV
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