| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2570 |
|---|
| Symbol | |
|---|
| ID | 4624220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 3150177 |
|---|
| End bp | 3151901 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639797699 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_943890 |
|---|
| Protein GI | 119946210 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0686059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAC TATTTCAAAA CAAAAAAACC TTAAATTTGT TTGCTTTGCT TCTATTCCTC
ACTGCTTTAT CCCCCTCTAT TTCTCATGCA GGTTTATGCT CAGATCCAAT AAAGAGTGCC
GCAGGATTCG AACCGAGTAA ACTGATGGTA GTGATCCCTG CAACATCTCA TACAAGAGAG
GAGTGGGAAT CTTTTTATAT TAAGTTTAAA GAACACCCAA AATCAAAAGA ATACGCATGG
TTATTTATAA ATCACGATAT TGGGTTCACA TCTCTAGGTA ACGTGAGGGA TATTGCTCAG
TCAATTAGTG TCTGCATTAA TCAAGTTGTA TCGACTGGTA AGTATGAGTA CGTTTCACTG
ATAGGGCATA GTATCGGAGG TATGATCGCA AGACGAGCAT ACCTTGAAGC TGCTGGTCAG
TTTTCTGACT ATTCAAAGGC TCACACTGAG TGGGCAAGCA AAGTCGACCG TATTTTATTG
TTTGCCTCTG TCAATCGAGG GATACCAAAT GGTATGCATT GGTGGGCGCG ATTAGCAAAC
TGGTTTCTTA GAAGTGTGCC TCACCCAAGA TTTATATTAG AAGATATGGC TTACGGTTCT
GATTTCGTCG TCGATACGCG TATTTCCTGG GTGCGATATT TTGCCAAGCT TGCACGTGAT
AAAAAACCAA CACCAAGAGT TGTCCAGTTT TGGGGTGATC AAGACTCTGT AGTCAACGAG
AAAGATAATG CAGACCTTGA AGCGTTTAGC GGAAATGTGC TAGAGCGAGT GGCAGATGCC
AAGCATGCGG ATTTAATTAG ATTCGAACCA GAATATACCA GTGTGCCTAA ACAGAGATGG
AAATTGTTTG AGAAGGAGTT ATTTTCTGAC AAGCCAGAAG AGTTATCAAA TCATACCTAT
CATGGGTCAT CAAGAATATT GATAATTCTT AATGGAATTC GTGATTCTAC TAATTCTGAA
TGGGTAATAG ATTTAAAAAA TCAAGCAACA AAAGTCTATG GTGAAAAGTC GGTAGAAGCT
CCCGATTATG GATATTTTAC TGCTGCTCAT TTCGCTTTCT CTCCATTAAG AGAAAAAAAC
ATTCCAAAAT TTCGCGACTT ATACTCCGAA TTGGTTGCGG CAAATCCTTT GGCAGAATTT
GATTTTATTG GTCATAGCAA TGGCACCTAT ATACTTGCAA ATAGTTTGAA GTCAACACCA
AGCATGAAGT TCAATAATGT ATCTTTAGTG GCTCCAGTTA TATCTGATGA ATATGATTGG
GCAAATATTT TCAAGAGAGG GCAAATCAAG TCATTAAGAT ATGATGTTGC GACAGAGGAT
TGGCCCGTCG GGATACTATG TGCCGCTTTA AATGCACTAG GTTCGTCAGA GGTGGGGCCA
TCAGGCGTTA CCCTGTTTAA AGGCAACAGC GACAAAATGG CTCGGTCAAA ATTAGAAAAA
GTGGGCTGGT TCGATGGGGG GCATAGTATC GCGCTACATC CGAATAACAG GGAGCATCTT
TTAGAGTTTG TACAGACGGG GGCACATTTT GATTCTGGCT TAGACTTAAA AAGCGAAGTG
GGATGGATGC GGATAGTCAC CAATGCGACA CAGTATCTAG TTTGGGCAAT GGTTTTGGGG
TTGTTGTGGT GGATGTTCAA GGCTGGTCGG TCAAAAGCAC TCAAACGTGT CGGAATAAGT
TGTTTCGCAA TATTAGTAGC ATATGTCGTT CTTGACATCA TATAG
|
|---|
| Protein sequence | MSALFQNKKT LNLFALLLFL TALSPSISHA GLCSDPIKSA AGFEPSKLMV VIPATSHTRE
EWESFYIKFK EHPKSKEYAW LFINHDIGFT SLGNVRDIAQ SISVCINQVV STGKYEYVSL
IGHSIGGMIA RRAYLEAAGQ FSDYSKAHTE WASKVDRILL FASVNRGIPN GMHWWARLAN
WFLRSVPHPR FILEDMAYGS DFVVDTRISW VRYFAKLARD KKPTPRVVQF WGDQDSVVNE
KDNADLEAFS GNVLERVADA KHADLIRFEP EYTSVPKQRW KLFEKELFSD KPEELSNHTY
HGSSRILIIL NGIRDSTNSE WVIDLKNQAT KVYGEKSVEA PDYGYFTAAH FAFSPLREKN
IPKFRDLYSE LVAANPLAEF DFIGHSNGTY ILANSLKSTP SMKFNNVSLV APVISDEYDW
ANIFKRGQIK SLRYDVATED WPVGILCAAL NALGSSEVGP SGVTLFKGNS DKMARSKLEK
VGWFDGGHSI ALHPNNREHL LEFVQTGAHF DSGLDLKSEV GWMRIVTNAT QYLVWAMVLG
LLWWMFKAGR SKALKRVGIS CFAILVAYVV LDII
|
|---|
| |