Gene Ping_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2563 
Symbol 
ID4624213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3138207 
End bp3139364 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content39% 
IMG OID639797692 
Producthypothetical protein 
Protein accessionYP_943883 
Protein GI119946203 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.791558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA ATAGTCTTGT AATTGCTGCT GCGGGATCTG GTAAAACAAC GCTTTTAGTT 
AAAACCGCGA TAGAAAATCC TAATAGGCCA ATTTTGATTA CAACTTACAC TGAATCAAAT
GAGCAGGAAA TAAGAGATAA GTTTGTTAAA AAAGTAAGAA CTGTACTAGC TAATGTCACG
ATTATCACAT GGTTTTCATT CCTTCTTAAG CATTGGGTTA GGCCATATCA GTGCAGACTA
AATGACTCTA TTGCGGATGA AAGAATTGGG TTTATTCTGG TCAACTGGCG CTCTGGCCTT
AAGTATAAAA ATAAGGATGG TCAAGGAGTA TACTGGTCAG AAAAAGATAA CTTCAAGAAT
TATTACTTCA CTAAAGACTT CAAGGTCTAC TCCGATAAGA TATCCAAGTT TTGCTTTGAG
GCAAATAAGG CAAGCAAGCA GGCAGTCGTT AACCGAATAT CAGCGCTATA TGGCATGATA
TTTATAGATG AAGTGCAAGA TCTTGCTGGG TTTGATTTAG AGTTGATCAA GCTTCTATTT
AGGTCAAAAT CAGAGGTCAT GTTAGTTGGA GATCCAAGAC AAGTTACCTA CAAGACTCAC
CATACAACTA AGTATTCTGA CTATGGAAAC GGAAATATCA AAGGATTTGT TACATCTGAA
AAAACGTTGG GTAAACGGAT ATCTTGCGAA GTTGATGAAA CAACACTTAA TAAGTCACAT
CGCTGTTCTC AGGATATTTG TGACTACTCT TCTAGACTCT ACCCTAAATT TCCAGCTGTT
GATGCATGTC AGTGTGATGA CTGCCGAAAA GAAAATATAC TGCACCAAGG GGTTTTCATC
GTCCCTAAGC GCCTTTGTTC GGAATACTTA CAGACATATC AGCCAATGCA GCTTCGCTGG
AATGCTAAAT CTAAAGTAGA TTCATCGTAT GAAGTAATGA ACTTTGGTGA GTCTAAAGGC
CTTACTATAG ATAGAGTACT TATTTACCCA ACCAAGGATA TGGTGAGTTG GATTCGTAAT
CCTAGCCAAC CTGAATTACT AAAGAACCCT ACTCGTGCGA GACTGTACGT GGCGCTGACT
CGTGCGCGCC ACAGTGTAGC TATAGTGTTA GACCCTGAGG AAAATGAAGT ATTGGAAGGA
GCTGTGGTAT ATAAATAG
 
Protein sequence
MNNNSLVIAA AGSGKTTLLV KTAIENPNRP ILITTYTESN EQEIRDKFVK KVRTVLANVT 
IITWFSFLLK HWVRPYQCRL NDSIADERIG FILVNWRSGL KYKNKDGQGV YWSEKDNFKN
YYFTKDFKVY SDKISKFCFE ANKASKQAVV NRISALYGMI FIDEVQDLAG FDLELIKLLF
RSKSEVMLVG DPRQVTYKTH HTTKYSDYGN GNIKGFVTSE KTLGKRISCE VDETTLNKSH
RCSQDICDYS SRLYPKFPAV DACQCDDCRK ENILHQGVFI VPKRLCSEYL QTYQPMQLRW
NAKSKVDSSY EVMNFGESKG LTIDRVLIYP TKDMVSWIRN PSQPELLKNP TRARLYVALT
RARHSVAIVL DPEENEVLEG AVVYK