Gene Ping_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2429 
Symbol 
ID4626395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2977738 
End bp2978466 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content41% 
IMG OID639797565 
ProductABC transporter for histidine/lysine/arginine/ornithine ATP-binding protein 
Protein accessionYP_943760 
Protein GI119946080 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.037997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTCG TTAGTGTTGA TAAGATCCAT AAATATTATG GTGAGAACCA TGTGCTAAAG 
GGAATTAATT TAAAGGTTAA AGCAGGAGAG GTGATTTCCA TTATCGGACG CAGTGGTTCA
GGTAAAAGTA CTTTATTGCG CTGTATGAAC GGATTAGAAG AGTTTCAGCA GGGCGCAATT
ATTGTTGATA ACCAGGCTGT TGAAAATGAC GAATTTAAAT TACGTTTATT AAGCCGCAGT
GTTGGCATGG TATTTCAAGG ATTTAATCTT TTTCCGCATA AAACCGTGGG CGAAAATATC
ATGCTTGCAC CGGCTTTGGT CTTAAAGAAA ACCCCGGAAG AATGCCGTCA ATTGGCTAAA
GAGTTACTTG AGAAAGTGGG CTTAAGTGAT AAATTTGATG CCTATCCAGC TAATTTATCC
GGGGGACAGC AGCAGCGAGT TGCTATCGCT CGCTCGCTGG CTATGTCACC TAAGGTTTTG
TTATGTGATG AAATTACTTC TGCGCTGGAT CCTGAGTTGG TTGGAGAAGT ATTAAAGGTT
TTAGAGAAAT TGAAAGCAGA AGGCATGACC TTAATATTAG TGACCCATGA AATGAACTTC
GCGCGCAATG TGGGTGATCG TGTGGTGTTT ATGAATCAAG GAAAAGTGTG GGAAACAGGG
CCAAGTGATG AAATCTTTGC CAATCCGCAA ACGCCAGAAT TGCAAAGCTT TATTTCAGCC
GTAAGATAG
 
Protein sequence
MYVVSVDKIH KYYGENHVLK GINLKVKAGE VISIIGRSGS GKSTLLRCMN GLEEFQQGAI 
IVDNQAVEND EFKLRLLSRS VGMVFQGFNL FPHKTVGENI MLAPALVLKK TPEECRQLAK
ELLEKVGLSD KFDAYPANLS GGQQQRVAIA RSLAMSPKVL LCDEITSALD PELVGEVLKV
LEKLKAEGMT LILVTHEMNF ARNVGDRVVF MNQGKVWETG PSDEIFANPQ TPELQSFISA
VR