Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2425 |
Symbol | |
ID | 4625971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2973032 |
End bp | 2974603 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639797561 |
Product | gamma-glutamyltransferase |
Protein accession | YP_943756 |
Protein GI | 119946076 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00679558 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACTATC AATCAGCATT TAGCGCATCG CATTATCAAG CCACTCAAAC AGGTCAAGCT ATATTAGATG CAGGAGGCAC TGCAAGCGAA GCGATGGTTG CAGCCGCTGC AATGATCACC GTGCAATATC CGCATATGAA CAGTATTGGC GGAGATAGTT TTTGGCTGAT TTGCCATCCG GGCAAAGCAC CGATTGCTAT TGATGCCTGT GGTGCGGCGA GCCATTCTAT TGATGTAAAT GCCTACCGTG CCAAGGGCGG TGAACTGCCC GAGAGCGGTG GCGAATCGGC TATTACTATG GCCGGTACTA TCTCGGGCTG GCAAAAAGCA TTGCAGATTA ACGGCGGTCA GCATTCACTC AGTGAACTGC TTAAGCCTGC TATAGAGGCT GCTGAACAGG GTATTGAAGT GACGCAAAGT TTTGTTGACG CCAGTGAAAA AACCTTCGAT CGTCTGCACG CACTTGATGA TTTTGCCAAT CTTTTTTTAA ATCAGTCCAA AACCTTAAAA GTAGGTGACA ATTTAGTTAA CCCGGAGCTT GCTGCAACGT TAACTCGTCT TGGCGAAGTG GGATTAGATG ACTTTTACCG TGGTGAAATC GCAGAAAAAG CGGCACTGGA TTTAAGTAAA GCCGGCAGCC CGATTACGCT CGATGATTTT CATATCCATC GGGTAAAAGT GATGGAGCCA CTGACGGTGG AAATATCCAA AGGACAATTA TATAACTTTG GTGCACCGAC TCAGGGACTG GCTTCGCTGT TGATTATCGC TATTTATGAT CAACTGGTAA GTACCACCGG TAATGAATTT GAGCACATGC ATTTGCTGGT TGAAGCAACC AAACAGGCAT TTATTATTCG TGACCGATTG ATTACCGATG AGGCCTGTTT AAGCCAACCA TTACAAGATT TACTCAGTGA AAAAATGATT CGTGAGTGTG CCGATCGTAT CTCATTAGAG AAAGCACAAC CTTGGCCGCA TCAGGCAAAA GTGGGTGATA CGGTTTGGAT GGGAGCGACG GACAAGTACG GTACTATGGT GAGCTTTATT CAAAGTATCT ATTGGGAATT TGGTTCGGGA GTGGTATTAC CAAGCACCGG TATTTTATGG AATATCCGCG GCAAAAGTTT CTCCCTTGAT GCCGATCACC ATAATGTTTT AGCGCCAGGT AAAAAACCCT TTCATACCCT TAATCCTGCC TATGCAGAGC TGCATGATGG CAGGCGCATG GTGTATGGAA CCATGGGCGG TGAAGGGCAG CCGCAGACTC AAGCCTGTCT GTTTAGCCGT TATATCTATC AAGGGTTGAA TCTCCAGGAT GCGATCGCAA AACCGCGTTG GTTACTGGGC CGCACTTGGG GAGATACGAC CAATAATTTA CGTTTAGAAT ACAGCCTTTA TAAAGCTCAC GCGGCGCAGC TAAGTAAGCT TGGTCATGAC GTCACTTATG TGACAGATAA TAATGAATTA ATGGGGCACG CCGGTGCAAT TGTTATAGAC TCGCAAGGTC TAGCCTGTGC AAGCAGCGAT CCCCGCAGTG ATGGAAGCAG TTTACTTGGA GATGTTTTAT GA
|
Protein sequence | MNYQSAFSAS HYQATQTGQA ILDAGGTASE AMVAAAAMIT VQYPHMNSIG GDSFWLICHP GKAPIAIDAC GAASHSIDVN AYRAKGGELP ESGGESAITM AGTISGWQKA LQINGGQHSL SELLKPAIEA AEQGIEVTQS FVDASEKTFD RLHALDDFAN LFLNQSKTLK VGDNLVNPEL AATLTRLGEV GLDDFYRGEI AEKAALDLSK AGSPITLDDF HIHRVKVMEP LTVEISKGQL YNFGAPTQGL ASLLIIAIYD QLVSTTGNEF EHMHLLVEAT KQAFIIRDRL ITDEACLSQP LQDLLSEKMI RECADRISLE KAQPWPHQAK VGDTVWMGAT DKYGTMVSFI QSIYWEFGSG VVLPSTGILW NIRGKSFSLD ADHHNVLAPG KKPFHTLNPA YAELHDGRRM VYGTMGGEGQ PQTQACLFSR YIYQGLNLQD AIAKPRWLLG RTWGDTTNNL RLEYSLYKAH AAQLSKLGHD VTYVTDNNEL MGHAGAIVID SQGLACASSD PRSDGSSLLG DVL
|
| |