| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2336 |
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| Symbol | |
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| ID | 4627122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2840668 |
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| End bp | 2842617 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639797476 |
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| Product | DNA ligase (NAD(+)) |
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| Protein accession | YP_943675 |
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| Protein GI | 119945995 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.182524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.116462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACAT TAAGTAAAAG TCAGGAAGAA GTATTTAAAA AACTAGCTGT GGAGTTATCA
ATGTCTAAGC TAATTGAAGC CTGTAATAAA AGTGTTGATT TTTCATCCCT TAATTCAAAT
GAACAGCTTG ATGTTTTAAA GGTAACCAAT GCGTTTTACC GTTCAGCTGA GCAAATCATT
AATGATTCAA CTTACGATGC TTTCCTAAGT GAGTTCAGTA CTTATAATCC CGATCATCCT
TACTTATTAA CTGTTGAGCC TGAAGTATTA GCGGATAGCA AAACAGTTCC TTTGCCAAAA
AAAATGCTAT CGACAGATAA AGCATATTCT TTTGAAGAAA TTAAAAAATG GATTGATAGA
TTGTTAAAAG CCGCGATAGA AGTCGGTGTA AGCGAATCTG AAATACAAAT CAAAGTCACT
CCAAAGCTAG ATGGCTATGC TGCATATGAT GATGGGATAT CTCTTTATAC TCGTGGAGAC
GGTGCCAGAG GCCAAGATAT TACCCGAGCG TTTAATAAGG GTCTACAAGT TGCAAACAAT
GGGGATCGAG GCTTAGGGCC GGGTGAAATT GTCATTAAGA AAAGCTATTT CGATACGGTT
CTTAGTGATA AATTTGAAAA TTCAAGAAAT ATTCAGGCAG CCATTATTGC AGAAAAGAAG
GTTGATGAAT CCATTCAAAA GGCAATAGAT GTAGGGGCTT GTGTATTTTT TCCTTTCTTA
TCACTTGAAA ACTGGATTGG CCATTACACC GAAATTTTAG TCGATTTCGA ATCAATTGTT
GAAAAGATGT GGTCTGCTGT AGATTATGAT ATTGATGGGG TTGTTTTAGA AGTAACAAAT
GAAACTCTAA AAGAGCATAT GGGGGCGACA CGTCACCATC ATAGATGGCA GATTGCTTTT
AAAGTAAATG CGGAATCAGC TGAAGTCAAA GTGTTAAATG TAACGCCGCA AACGTCAAGA
ACTGGACGTG TTACACCCGT CGCCGAGTTA GAGCCTACCA AGCTAAGTGG CGCAACAATT
AGTAGAGCTA CTGTACACCA TTACAATATG GTTAAAACTA ATGGTGTTGG CCCTGGTGCA
ATCGTGCAGC TTGTTAGAAG CGGACTCGTT ATTCCAAAAA TTGAGAAAGT GATTAAAGCG
GTTGAGCCCC AGTTAGCCAA GGAATGCCCT AGTTGTGGTA CGCATTTAAT TTGGGAATCA
GACCATTTGG TATGCCCTAA TAAAACCGAC TGTCCAGCAC AAACAGAGAA TACCCTGGTC
CATTTTTTCA AAACATTAGG CAATAATGAT GGTTTTGGTC CTAAGGTGAT TGAAAAGCTT
CATGAGTTTG GAATAAAGAA AATCCATGAA ATCTATGAGC TAAAACAAGA AAGCTTTGTC
AGTTTTGGAT TTGGCGATAA AACAGCTCAA AATTTAGTGG AGCAGCTTCA AGTTAGTCGT
GATGTTGAAA TTGAAGACTG GCGATTTTTG GCCGCCTTTG GTGTAAGTCG ATTAGCTGGG
GGAAATTGTG AAAAATTATT GCAACACCAT TCATTAGACT CTTTGTTTGA AGCTACTGTG
GAAGATTTAG TGCAGCTTGA TGGTTTTGCA CAAGTGAGTG CAGATGCCAT TGTAGAAGGC
TTAGCCAATA TAAAGGAAGA ATTTCTTAAA CTGAGTGCAT TGAATTTTAA TTTGACAATA
ACCCCGAAGG CTTCAGAAAA ATCTCCGGGT GAAACCCCCG TCTTTGGAAA AATTATTGTG
TTTACTGGCG CGATGACTCA AGGTTCAAGA GGAGATATGG AGAAGCAAGC TAAAGCACTG
GGCGCTAAGG TTGCTAAATC AGTAACCGGT AAGACTTCAC TCCTTGTCAC TGGCGATAAG
GTAGGGGCAA ATAAAATTAA TGCCGCTCGT GATAAAGGAG TTCAGGTACT TTCAGAATTG
GATTACTTGG CGTTAATATC AACTTACTAG
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| Protein sequence | MITLSKSQEE VFKKLAVELS MSKLIEACNK SVDFSSLNSN EQLDVLKVTN AFYRSAEQII
NDSTYDAFLS EFSTYNPDHP YLLTVEPEVL ADSKTVPLPK KMLSTDKAYS FEEIKKWIDR
LLKAAIEVGV SESEIQIKVT PKLDGYAAYD DGISLYTRGD GARGQDITRA FNKGLQVANN
GDRGLGPGEI VIKKSYFDTV LSDKFENSRN IQAAIIAEKK VDESIQKAID VGACVFFPFL
SLENWIGHYT EILVDFESIV EKMWSAVDYD IDGVVLEVTN ETLKEHMGAT RHHHRWQIAF
KVNAESAEVK VLNVTPQTSR TGRVTPVAEL EPTKLSGATI SRATVHHYNM VKTNGVGPGA
IVQLVRSGLV IPKIEKVIKA VEPQLAKECP SCGTHLIWES DHLVCPNKTD CPAQTENTLV
HFFKTLGNND GFGPKVIEKL HEFGIKKIHE IYELKQESFV SFGFGDKTAQ NLVEQLQVSR
DVEIEDWRFL AAFGVSRLAG GNCEKLLQHH SLDSLFEATV EDLVQLDGFA QVSADAIVEG
LANIKEEFLK LSALNFNLTI TPKASEKSPG ETPVFGKIIV FTGAMTQGSR GDMEKQAKAL
GAKVAKSVTG KTSLLVTGDK VGANKINAAR DKGVQVLSEL DYLALISTY
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