Gene Ping_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2179 
Symbol 
ID4625334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2655256 
End bp2656035 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content38% 
IMG OID639797317 
Producthypothetical protein 
Protein accessionYP_943519 
Protein GI119945839 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.403668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.519759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC TTTTTTTTGA CCCCGGCACT TGGGCGTTAC TTGTTTTTGT AGGCTTGATC 
GCAGGTTTTA TTGATGCGGT CGTTGGCGGA GGAGGCATGC TGACGGTCCC AACATTATTA
AGCTTAGGTC TACCTGCCCA CTTAACCCTT GGTACCAATA AATTATCTGC TTGTTTTTCT
TCGGGCATCG CATCTTATAC TTATTTTAGA AAACAATTAT TTAACCCGCA ATTTTGGAAA
AATAGTTTCT ACAGTACGCT AACAGGTGCC TTTATTGGCA CGGTGTTTGT TAATTTAATT
GATACTCAAT GGCTAGAAAA AATACTGCCT GTTATTATTT TGATTGTCGC TCTCTATACT
TTATTAAATC AGATACATGA TATTGATAAT CATAAACTGC CTGAAAATAA ATCTATTTTT
CGCATAAAAC AGATAATTCA AGGGTTTTTG CTGGGCTTTT ATGATGGCTC CTCCGGTCCG
GGAACAGGGG CATTTTGGGT AATTTCCAAT ATGCGCCTTT ATAAACTAAA CATTTTGCTG
TCTAGCGGCA TTGCAAAGGC GATGAATTTC ACTAGTAATG TGACTTCCCT ATTAATATTC
ATCTATTTTG GTCAAGTAAA CTGGTTGATT GGGTTAACAA TGGGAGCCTG TTTGATGCTT
GGCGCATACA TAGGGGCTCA TTCTGCCATT CATTTTGGCG CTAAATTTAT ACGCCCCGTT
TTTATATTAA TTGTGGTCAT CATGGCCATT AAATTAGGGT ACGACGCATG GTTCAGTTAA
 
Protein sequence
MTELFFDPGT WALLVFVGLI AGFIDAVVGG GGMLTVPTLL SLGLPAHLTL GTNKLSACFS 
SGIASYTYFR KQLFNPQFWK NSFYSTLTGA FIGTVFVNLI DTQWLEKILP VIILIVALYT
LLNQIHDIDN HKLPENKSIF RIKQIIQGFL LGFYDGSSGP GTGAFWVISN MRLYKLNILL
SSGIAKAMNF TSNVTSLLIF IYFGQVNWLI GLTMGACLML GAYIGAHSAI HFGAKFIRPV
FILIVVIMAI KLGYDAWFS