| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2072 |
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| Symbol | |
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| ID | 4624675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2520901 |
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| End bp | 2522589 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639797220 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_943422 |
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| Protein GI | 119945742 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAA CAGAATATGA CTATATTATT GTAGGTGCCG GAAGTGCCGG TTGTGTCCTT
GCAAATCGCT TGTCAGAAGA TCCAGAAAAT CAAATTCTTC TATTAGAAAC CGGTGGCAGC
GATAAGAGTA TCTTTATTCA AATGCCGACC GCATTATCTA TACCTATGAA CAGTAAAAAA
TATGCCTGGC AGTTCGAAAC ACAAGCAGAA CCGTTTTTGG ATAATCGCCG CATGCATTGT
CCGCGCGGTA AAGTATTAGG GGGTTCGTCC TCTATTAACG GCATGGTCTA TGTGCGCGGC
CATGCGCGTG ATTTTGACGA ATGGCAGGCG TCTGGCGCTA AAGATTGGGA TTATGCGCAT
TGTCTACCCT ACTTTAAAAA AGCCGAGACC TGGTCATTTG GCGGTAATGA TTACCGTGGA
GACACTGGCC CGCTTGCTGT GAATAATGGC AATAACATGA AAAACCCGTT ATACCAGGCC
TTTGTGGATG CGGGTGTTGA TGCCGGTTAT TTAGCAACGA AAGATTACAA TGCTGAGCAG
CAGGAAGGTT TTGGCCCAAT GCACATGACT GTTAAAAATG GGGTCCGTTG GTCTACGGCG
AATGCCTATT TAAGACCGGC TATGAAGCGC AATAACCTGA CGGTTGTGAC TCATGCTCTG
GTACACAAAG TATTGCTTGA AGGTAAAAAA GCGGTTGGTG TGCGTTATGA GGTTAAAGGT
CAATTAACGG ATACGCGTTG TAATAAAGAA GTGCTGCTCT GTGCAGGCTC AATCGGTTCT
CCGCATATTC TGCAACTGTC GGGTATTGGT GAAGCCGATA CTTTGGCACA AGCTGGCATC
GAGCAACATC ATGAGCTACC AGGTGTGGGT AAAAACTTGC AGGATCATCT GGAGTTTTAC
TTTCAGTTTA AATGCTTAAA ACCGATATCA CTTAACGGTC AACTGGGTCC GTTAAACAAA
TTATTGATAG GTGTACGCTG GATATTAAAC AAATCGGGTT TAGGCGCGAC CAATCACTTT
GAGTCATGTG GCTTTATTCG CTCTAAGAAT AGTTTGGAAT GGCCGGATCT CCAGTATCAC
TTTCTACCGG CGGCCATGCG CTATGATGGC AAAGAAGCCT TTGCAGGTCA TGGTTTCCAG
GTTCATGTCG GTCATAACAA ACCGAAAAGC CGCGGTGCGG TGAAAATTGT ATCAAAGGAC
GCCCATATTG CGCCACAAAT TCAATTTAAC TATTTATCAC ACCAGGATGA TATTGAAGCC
TTTCGCGCTT GTGTTCGCTT AACCCGCGAA ATCATTAATC AGCCCGGCTT AGATGAATAC
CGCGGCGAAG AAATTCAGCC AGGACTTGCA ATCCAGAGCG ATCAAGAAAT TGATCAGTTT
GTTCGCAGTT CAGTTGAAAG TGCCTATCAC CCCTCCTGCT CATGCAAAAT GGGTGAAGAT
GCCATGTCGG TAGTGAACTC TGATACGAAA GTCCATGGTA TCGAAGCGCT TCGCGTTGTC
GATTCCTCGA TTTTCCCAAC AATTCCTAAC GGCAATCTGA ATTCACCGAC CATTATGGTG
GCAGAACGTG CAGCCGATAT TATTTTAGGT AAAAAACTGC TTGCGCCAAA CGTAGCTAAC
GTCAAGGTAG CCGATGACTG GCAGAACAGC CAACGATTAC AGGACCCTAA ACGAAAGGTT
AACGCTTAA
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| Protein sequence | MTKTEYDYII VGAGSAGCVL ANRLSEDPEN QILLLETGGS DKSIFIQMPT ALSIPMNSKK
YAWQFETQAE PFLDNRRMHC PRGKVLGGSS SINGMVYVRG HARDFDEWQA SGAKDWDYAH
CLPYFKKAET WSFGGNDYRG DTGPLAVNNG NNMKNPLYQA FVDAGVDAGY LATKDYNAEQ
QEGFGPMHMT VKNGVRWSTA NAYLRPAMKR NNLTVVTHAL VHKVLLEGKK AVGVRYEVKG
QLTDTRCNKE VLLCAGSIGS PHILQLSGIG EADTLAQAGI EQHHELPGVG KNLQDHLEFY
FQFKCLKPIS LNGQLGPLNK LLIGVRWILN KSGLGATNHF ESCGFIRSKN SLEWPDLQYH
FLPAAMRYDG KEAFAGHGFQ VHVGHNKPKS RGAVKIVSKD AHIAPQIQFN YLSHQDDIEA
FRACVRLTRE IINQPGLDEY RGEEIQPGLA IQSDQEIDQF VRSSVESAYH PSCSCKMGED
AMSVVNSDTK VHGIEALRVV DSSIFPTIPN GNLNSPTIMV AERAADIILG KKLLAPNVAN
VKVADDWQNS QRLQDPKRKV NA
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