Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2063 |
Symbol | |
ID | 4624666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2513142 |
End bp | 2513867 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639797212 |
Product | hypothetical protein |
Protein accession | YP_943414 |
Protein GI | 119945734 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.804932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAGAG CATATCAAAA CCGCAAATTG TCTATGGCCA AAACAGCGGG CGCTAAAACT AAAGTTTATT CTAAGTACGG TAAAGAGATT TACGTTGCGG CTAAAAATGG TGGGTTTGAT CCGGATGGAA ACCTCTCATT ACGTCATTTA ATCGATGGTG CCAAAAAAGA CCAAGTACCC ACACACGTCA TCGAACGTGC GATTGAAAAA GCGAAAGGCG GCGGTGGTGA AGATTATGAA CGCGCCAGCT ATGAAGGTTA TGGTCCCGGT GGATGTTCTG TAATTGTGGA TTGTTTAACC GATAACAATA AACGTACTTG GACTGATGTA CGCAACTGTT TTATGAAAAC CGGTGGTAAC ATTGGTTCAC CCGGTACAGT TGCGCATATG TTTGAACATC AAGCTGTTTT TGTATTTAAA GGCGAAGATG ATGAAGCGGT TTTAGAAGAG CTGATGATGG CTGATGTGGA CGTGATCGAT GTTGAAGGTG AAGACGGTAA GATCACTGTT TTTTGTCCCC ACACTGAATT CTATAAAGCA AAAACAGCAT TAAATGAGAT TTACCCAAAT CTTGAGCTGG ATATAGAAGA AATCACTTTT GTACCGCAAA TAGACCATGA TATTGCACCT GAGCATGTTG ATAAATTTGA AAAATTTATG GCTATGTTAG AAGACTGTGA TGATGTGCAA GAGGTTTACC ATAACGCAGT ATTACCTGAT GAATAA
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Protein sequence | MGRAYQNRKL SMAKTAGAKT KVYSKYGKEI YVAAKNGGFD PDGNLSLRHL IDGAKKDQVP THVIERAIEK AKGGGGEDYE RASYEGYGPG GCSVIVDCLT DNNKRTWTDV RNCFMKTGGN IGSPGTVAHM FEHQAVFVFK GEDDEAVLEE LMMADVDVID VEGEDGKITV FCPHTEFYKA KTALNEIYPN LELDIEEITF VPQIDHDIAP EHVDKFEKFM AMLEDCDDVQ EVYHNAVLPD E
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