Gene Ping_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2063 
Symbol 
ID4624666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2513142 
End bp2513867 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content40% 
IMG OID639797212 
Producthypothetical protein 
Protein accessionYP_943414 
Protein GI119945734 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.804932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGAG CATATCAAAA CCGCAAATTG TCTATGGCCA AAACAGCGGG CGCTAAAACT 
AAAGTTTATT CTAAGTACGG TAAAGAGATT TACGTTGCGG CTAAAAATGG TGGGTTTGAT
CCGGATGGAA ACCTCTCATT ACGTCATTTA ATCGATGGTG CCAAAAAAGA CCAAGTACCC
ACACACGTCA TCGAACGTGC GATTGAAAAA GCGAAAGGCG GCGGTGGTGA AGATTATGAA
CGCGCCAGCT ATGAAGGTTA TGGTCCCGGT GGATGTTCTG TAATTGTGGA TTGTTTAACC
GATAACAATA AACGTACTTG GACTGATGTA CGCAACTGTT TTATGAAAAC CGGTGGTAAC
ATTGGTTCAC CCGGTACAGT TGCGCATATG TTTGAACATC AAGCTGTTTT TGTATTTAAA
GGCGAAGATG ATGAAGCGGT TTTAGAAGAG CTGATGATGG CTGATGTGGA CGTGATCGAT
GTTGAAGGTG AAGACGGTAA GATCACTGTT TTTTGTCCCC ACACTGAATT CTATAAAGCA
AAAACAGCAT TAAATGAGAT TTACCCAAAT CTTGAGCTGG ATATAGAAGA AATCACTTTT
GTACCGCAAA TAGACCATGA TATTGCACCT GAGCATGTTG ATAAATTTGA AAAATTTATG
GCTATGTTAG AAGACTGTGA TGATGTGCAA GAGGTTTACC ATAACGCAGT ATTACCTGAT
GAATAA
 
Protein sequence
MGRAYQNRKL SMAKTAGAKT KVYSKYGKEI YVAAKNGGFD PDGNLSLRHL IDGAKKDQVP 
THVIERAIEK AKGGGGEDYE RASYEGYGPG GCSVIVDCLT DNNKRTWTDV RNCFMKTGGN
IGSPGTVAHM FEHQAVFVFK GEDDEAVLEE LMMADVDVID VEGEDGKITV FCPHTEFYKA
KTALNEIYPN LELDIEEITF VPQIDHDIAP EHVDKFEKFM AMLEDCDDVQ EVYHNAVLPD
E