Gene Ping_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2029 
Symbol 
ID4624589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2475225 
End bp2475605 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content37% 
IMG OID639797187 
Productputative endoribonuclease L-PSP 
Protein accessionYP_943389 
Protein GI119945709 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0480857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0222602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA TCATCAACAC AGCAAAAGCA CCTGCAGCAA TTGGCCCTTA CTCTCAAGCA 
AATACATTTG GTGATCTTGT ATTTACATCA GGTCAGTTAG GCTTGAATGC AGATACAATG
GTATTGGTAG AAGGTGGCAT CAAAGAGCAA TCTTATCAAG TACTTAAAAA TCTTGTTATT
GTGCTTGAAG CTGCTGGTGC ATCAGCTGAT ACCGTTCTTA AAACAACCTG TTTTATTGCG
GATATGAATG ACTTTGCTGC ATTTAATGAA GTTTATGCTG AATTTTTTGC TAAAAATGCG
CCAGCTCGCT TATGTGTAGA AGCTGCTCGT TTACCAAAAG ATGCATTAAT TGAAGTTGAA
GCTATTGCCT ATAAAGCATA A
 
Protein sequence
MKTIINTAKA PAAIGPYSQA NTFGDLVFTS GQLGLNADTM VLVEGGIKEQ SYQVLKNLVI 
VLEAAGASAD TVLKTTCFIA DMNDFAAFNE VYAEFFAKNA PARLCVEAAR LPKDALIEVE
AIAYKA