Gene Ping_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2020 
Symbol 
ID4624703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2461184 
End bp2463613 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content53% 
IMG OID639797181 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_943383 
Protein GI119945703 
COG category[P] Inorganic ion transport and metabolism
[S] Function unknown 
COG ID[COG2217] Cation transport ATPase
[COG3350] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA AACTAAATAA AGAACAAGAC CAGCTTAACG ATCCAGTCTG TGACATGTCG 
GTATCACATG ACTCCAAACA CACTTACGAT TATGCCGATA AACAGTATTT ATTCTGCAGT
GAACACTGCC TGAAGAAATT CAAGGAGCAG CCTGAACAGT ATCTGGATAA GGAAACGTCC
CCACCAAGTA AAACAGAGGG TGAGTCAAAG ACCTACACCT GCCCCATGCA TCCTGAAATT
CAACAGCACG ATCCCGGAAC CTGCCCAAAA TGCGGGATGG CGCTGGAGAC GATAGGCGTG
TCGGCAACGG CGACGGCAAC CACCTATACC TGTCCCATGC ATCCTGACGT TACTCAGGAT
AGCCCCGGTA ATTGCCCCAA GTGCGGAATG GCTCTGGAGG GGGAGACATC CGGCGGTGAA
CAAAAAAATG AAGAGCTTAT CGATATGAGC CGGCGTTTTT GGGGTTGTAC CGCGCTCGCT
CTGCCGGTCT TTTTTCTGGC CATGACTGCC GATATGCTGC CTGGCTGGTT ACCAAACTGG
CTGTCGCTGC AGATGGTGCA ATGGATTGAA TGTGCGCTGG CGACACCTGT TGTTGTCTGG
GGCGGTTGGC CATTTTTTGT GCGCGGCTGG CAATCTGTCC GGACCTGGAA CCTGAATATG
TTTACCCTGA TCGCGCTGGG TGTCTCGGTC TCCTGGAGCT ACAGCATGGT GGCTCTGTTG
TTACCCGGGC TCTTTCCAAC CATCATGCAG ATGTCTGACG GGCTGGTGCC TGTTTATTTT
GAAGCTGCGG CCATGATCAC AACCCTAGTT CTGCTTGGGC AGGTGCTTGA ATTGCGCGCC
CGCTCTCGAA CCAATGCGGC CATTGAGATG CTGCTCAGTC TTGCTCCTAA TACAGCCCGT
ATCGTACGGG AGGATGGAAC GGAAGAGGAT ATCCCGCTGG ATCAGGTACA GTCCGGTGCT
ACCTTGCGTG TTCGTCCCGG TGATAAAGTA CCGGTAGATG GTACGGTTAT CGAAGGAGAT
AGCAACATTG ATGAATCCAT GGTCACCGGC GAATCGCTCC CGGTGACAAA ATCAGCCGGT
GAGAAGCTGA TCGGCGCGAC GGTTAATGGA ACTGGCAGTT TATTAATGCG GGCAGAAAAA
GTTGGTTCCG ATACTCTGTT GGCACAAATT GTCGATATGG TAGCCAAAGC ACAGCGTACG
CGAGCGCCCA TTCAAAAGTT GGCCGATCTC GTGGCGGGAT ATTTTGTCCC TGCTATTGTG
GGTTGTGCTG TGCTTACTTT TGCCGTGTGG TTCGGATGGG GGCCGGAACC GCGTCTGGCA
CATGCCGTAG TCAATGCGGT TGCGGTATTG ATCATCGCCT GTCCCTGCGC ATTGGGACTT
GCTACACCCA TTTCGATTAT GGTCGGGACG GGGCGCGGTG CCACGGCCGG TGTTTTGATC
AAGAATGCCG AAGCGCTGGA GATCATGGAA AAGGTCGATA CTCTGGTGGT GGACAAGACC
GGTACGCTGA CCGAGGGTAA GCCAAAGCTG GTTGCAGTGC AGGCGGAAGA GGGATTTGAC
GAGGATCAAC TGGTACGTCT GGTCGCCAGC CTCGAACGGG CTAGCGAACA CCCTTTGGCG
GAAGCCATTG TGCGTGGTGC TGAAGAAAAG GGTATCAAGC TGGTTAAGGC CGATAATTTT
AAGTCGCTGA CCGGAAAAGG GGTCACCGGT GAGGTTGATG GAGAATCTGT CGCAGCGGGC
AATGTTGCAC TGATGGAAAG TCTGGGAATC AACGTGGAAA ATTTATCTCA ACAAGCAGAC
CAGCAACGCG CCGAAGGACA GACGGTTATG CTGATTGCCA TCAATGGCAA GGCAGCGGGG
TTAATCGGCG TCGCTGATCC GATCAAGGAG TCAACTGCCG AAGCCATTCG TGATTTGCAT
GGCGAAGGTA TCAAAATAGT GATGATTACC GGTGACAATC AGATCACTGC CAAGGCGGTT
GCAGGCAAGC TGGAAATCGA TCAGGTACAT GCCGAAGTAC TGCCTGAAGA GAAAGCTACA
CTTATCAAAA AACTTCAGGC AGAAGGCCAT ATTGTTGCCA TGGCGGGTGA CGGCATCAAC
GATGCGCCGG CACTGGCTCA GGCTCATGTC GGTATTGCCA TGGGCACTGG CACCGATGTG
GCCATAGAAA GCGCCAGCAT CACTTTAGTC AAAGGCGATT TACGGGGCAT TGTCAGGGCC
AGACGATTAA GCCGGGCCAC TATGCGTAAT ATCAGGCAGA ATTTATTTTT CGCTTTCTTT
TACAACTCGG CGGGTGTGCC GATTGCCGCG GGAGTACTGT TTCCCTTCTT TGGCATATTG
CTGTCACCAA TGATCGCTGC CGCAGCCATG AGCTTCAGCT CCGTTTCAGT GATCAGTAAT
TCACTGAGAC TAAAGAGGGT GAAATTATAA
 
Protein sequence
MSAKLNKEQD QLNDPVCDMS VSHDSKHTYD YADKQYLFCS EHCLKKFKEQ PEQYLDKETS 
PPSKTEGESK TYTCPMHPEI QQHDPGTCPK CGMALETIGV SATATATTYT CPMHPDVTQD
SPGNCPKCGM ALEGETSGGE QKNEELIDMS RRFWGCTALA LPVFFLAMTA DMLPGWLPNW
LSLQMVQWIE CALATPVVVW GGWPFFVRGW QSVRTWNLNM FTLIALGVSV SWSYSMVALL
LPGLFPTIMQ MSDGLVPVYF EAAAMITTLV LLGQVLELRA RSRTNAAIEM LLSLAPNTAR
IVREDGTEED IPLDQVQSGA TLRVRPGDKV PVDGTVIEGD SNIDESMVTG ESLPVTKSAG
EKLIGATVNG TGSLLMRAEK VGSDTLLAQI VDMVAKAQRT RAPIQKLADL VAGYFVPAIV
GCAVLTFAVW FGWGPEPRLA HAVVNAVAVL IIACPCALGL ATPISIMVGT GRGATAGVLI
KNAEALEIME KVDTLVVDKT GTLTEGKPKL VAVQAEEGFD EDQLVRLVAS LERASEHPLA
EAIVRGAEEK GIKLVKADNF KSLTGKGVTG EVDGESVAAG NVALMESLGI NVENLSQQAD
QQRAEGQTVM LIAINGKAAG LIGVADPIKE STAEAIRDLH GEGIKIVMIT GDNQITAKAV
AGKLEIDQVH AEVLPEEKAT LIKKLQAEGH IVAMAGDGIN DAPALAQAHV GIAMGTGTDV
AIESASITLV KGDLRGIVRA RRLSRATMRN IRQNLFFAFF YNSAGVPIAA GVLFPFFGIL
LSPMIAAAAM SFSSVSVISN SLRLKRVKL