| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1973 |
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| Symbol | |
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| ID | 4627050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2400666 |
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| End bp | 2401403 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639797138 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_943340 |
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| Protein GI | 119945660 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0324346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.993482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGAAT TTAAAGCACA ACCTGACTCT TTAAACGGAA AAACCATTCT AATTACAGGG
GCTGGCGCAG GTATTGGTAA GACGCTCGCT TTACACTGTG CAACCCTCGG TGCAAAAGTC
ATACTATTAG GCAAGACAGT AAAAAAATTA GAAGCGGTTT ATGATCAAAT AGAATTACAG
GGTAAACAAC AAGCGGCTAT TTTGCCCGTT GATTTAAATG GCGCTACCGA GGAGCATTAT
GCTGACTTAG CGGATACCAT AAAACGTGAA TATGGGAAAC TGGATGCACT GGTACATAAC
GCAAGTCAGT TGGGTGTACT GGGCCCTTTC GCTCAAATTG AGAAATCGAC CTGGGACGAG
ATAATACAAA CTAATGTAAC GGCTCAATTT TTATTAACCA AAGCGTTAAT TCCAGTACTT
AGTCTGGCCC CGCAGGCATC GGTGATTTTC ACCACATCAA GTGTTGGTCA TGCAGGCCGA
GCATACTGGG GAGCTTATAG TATTTCTAAG TTTGCAAGCG AAGGCATGAT GCAGGTTTTA
GCCGATGAAT ATGAGCATAG TTCATTACGT TTTAACGCCA TTAATCCGGG TGCCACACGC
ACAGAAATGC GCGCCAGTGC CTACCCTGCA GAAGATAGCT CTCTCTTAAA AACGGCGACA
GATATTATGC CTAGCTATTT GTATTTATTA AGTGATGCGA GTAAAGGCGT TACCGGGCAG
CGAATCAATG CACAGTAA
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| Protein sequence | MNEFKAQPDS LNGKTILITG AGAGIGKTLA LHCATLGAKV ILLGKTVKKL EAVYDQIELQ
GKQQAAILPV DLNGATEEHY ADLADTIKRE YGKLDALVHN ASQLGVLGPF AQIEKSTWDE
IIQTNVTAQF LLTKALIPVL SLAPQASVIF TTSSVGHAGR AYWGAYSISK FASEGMMQVL
ADEYEHSSLR FNAINPGATR TEMRASAYPA EDSSLLKTAT DIMPSYLYLL SDASKGVTGQ
RINAQ
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