Gene Ping_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1966 
Symbol 
ID4627043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2392410 
End bp2392910 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content36% 
IMG OID639797131 
Productcolicin V production protein 
Protein accessionYP_943333 
Protein GI119945653 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.530952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGGT TTGATATCGC CATTCTTAGC ATTATAGCTG TTTCATCTTT TATCAGTTTA 
TTACGGGGTT TTACTAAAGA AGCACTCTCC TTAGTGACTT GGTTCTGCGC TTTTTTCATT
GCCAGTAATT TTTACCTTGA AGTGGCCGTC TATTTAACAG AATTAGAAGA CCCATTAATT
CGCAACGCTG TTGCGATCGC TATTTTATTT ATTGCGGTGT TATTACTGGG TGCCTTAATT
AACTACATTA TTAACCGCTT GGTTGCTGTT ACCGGGTTGT CCGGCACAGA CAGACTACTT
GGTATTGTTT TTGGTGCTAT TCGTGGTGTT TTAATTATCA GTGCACTCCT GTTTTTTATT
GATTCATTTA CTAATTTAAA CCAGAGCGAC TGGTGGAAAG AATCAACGTT GGCACCTGAG
TTTGGAATAA TTATCGAGTG GTTCTTTCAA CATATTGAAA ATGCCTCTAG TTTTTTGAAT
AATATTAAGG AAATCAATTA A
 
Protein sequence
MSWFDIAILS IIAVSSFISL LRGFTKEALS LVTWFCAFFI ASNFYLEVAV YLTELEDPLI 
RNAVAIAILF IAVLLLGALI NYIINRLVAV TGLSGTDRLL GIVFGAIRGV LIISALLFFI
DSFTNLNQSD WWKESTLAPE FGIIIEWFFQ HIENASSFLN NIKEIN