| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1880 |
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| Symbol | |
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| ID | 4624857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2284517 |
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| End bp | 2285950 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639797053 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_943255 |
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| Protein GI | 119945575 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0268707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0491745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCTA AATATCACAT TGTTATCACA GTCACTTTTT TATTAGTGAC ACTTTCAGTC
ATTCTCTCCA CCGTGAATTA TTGGGTTTCT CTCAATTCAA CAGAAGTGCA GCTCAGGGAA
CGTTCTTTAC CATTAACCGT TGATAACATC TCGATGGAAA TTCAAAAAAA AATTATCGGA
CCTCATATTA TCTCGTCCAT GATGGCCAAT GACACTTTCC TGCAAGACTG GTTAATTAAT
AATGAAGGTG ATGTTGATAA AATTTCAAAA TATCTTGAAA TGATTAAAAA TAAAAACAAG
TTGCTGGTCA CCTTTCTTGT CTCCGGAAAA ACTAAAAATT ATTATACTGC CGAGGGTTTG
TTAGAGCAGG TTGTTGAAGA TAATCCAAAT AATGCTTGGT ATTTTAGCTT TATGGAAAAG
CCTGACAAGA ATGAAATTAA CTTCGATTTC AATGACAATA TTGATAATGA GATGATTATA
TTTATCAATC ATAAAATTTA TGATCAACAG TCTCATCTAA TAGGCGCGAC AGGTATTGGT
TTAAAATTTT CTGATGTAAA CGAGATGCTC AATAATTTTC GGCAAAAATA TAATTTTAAT
GTTTATTTTT TAAATCAGGC GGGTAAAGTT ATCCTTTACG AAAAAGGTGT TAACCCTCTA
AGGGATATTA AAAATATTTC TGAACTAAAC GTCCTGAGAG ATTCTATTAT TAGTAAAGAA
TCTAAACTGC TTGAATATAC CAAGGAAAGT GAAGAGTATT TAATGAGTAC CAAGTATATT
CCTGAGCTGG ACCTCTATTT AGTTGTGGAG GCAAAACGTT CAGAATTTTT ATTGAATGTA
CAAAAAACAT TCTATTTTAA CTTGTTATGC TCACTACTTG GGACGATCCT GATAGCTTTT
TTAATTTTAA AAACCGTCAA TAAATATTAT AAAGAGATGG AACATCTTGC TAAATATGAT
GCCTTAACCA ATTTAAAAAA CCGCCGCGCA TTTAATGAAG AGCTGGAGCA TTCTTTATTA
CTTTGCAAAC GGCGGGCCAG TCATTTATCT CTGACCTTCT TTGATTTGGA TGATTTTAAA
AGTGTGAATG ATACCTTTGG ACATCAAACC GGAGACAAAG TACTTCAATA TGTTGCCGAT
ATTTTAAAAG ATGATATCCG TCAGACGGAT ATCATAGGAC GATGGGGCGG AGAAGAGTTT
ATTGTCGCTT TTATTGATAC TGAGTTAGAA GACGCAAAGT TTATTACTGA AAAAATCAGA
GCACATATTG AAAAAGATAG CTTTTTATCT CAATTAAAAA ATATGAAAGT AACGGCCAGT
TTTGGTCTTA CAACTATCAC CACTCAAGAT ACCCTGGACT CACTATTAGA GAGGGCAGAT
CAAGCCCTTT ATAAAGCCAA AGAGAATGGG AAAAACCAAG TTTTTTGCCT TTAA
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| Protein sequence | MKSKYHIVIT VTFLLVTLSV ILSTVNYWVS LNSTEVQLRE RSLPLTVDNI SMEIQKKIIG
PHIISSMMAN DTFLQDWLIN NEGDVDKISK YLEMIKNKNK LLVTFLVSGK TKNYYTAEGL
LEQVVEDNPN NAWYFSFMEK PDKNEINFDF NDNIDNEMII FINHKIYDQQ SHLIGATGIG
LKFSDVNEML NNFRQKYNFN VYFLNQAGKV ILYEKGVNPL RDIKNISELN VLRDSIISKE
SKLLEYTKES EEYLMSTKYI PELDLYLVVE AKRSEFLLNV QKTFYFNLLC SLLGTILIAF
LILKTVNKYY KEMEHLAKYD ALTNLKNRRA FNEELEHSLL LCKRRASHLS LTFFDLDDFK
SVNDTFGHQT GDKVLQYVAD ILKDDIRQTD IIGRWGGEEF IVAFIDTELE DAKFITEKIR
AHIEKDSFLS QLKNMKVTAS FGLTTITTQD TLDSLLERAD QALYKAKENG KNQVFCL
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