Gene Ping_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1779 
Symbol 
ID4626112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2163161 
End bp2164054 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content48% 
IMG OID639796958 
Productesterase/lipase/thioesterase family protein 
Protein accessionYP_943160 
Protein GI119945480 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0322444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.374149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC ACTCCCTCTA TGCAGAAACC AGACCATTGA AAATCAAACA CATTATTGCC 
AGCGTTAGCC TGTTGTTGTT AAGTGCCTGC AGCTCGACCG GACTTTTCCT GTTGAACTCT
GCACTGAGGC TAAATTCCGA GCATAGCGTC AGCAAGGATG TCGCATTCGG TCAAGACGAG
TGGCAGAAGT TAGATATCTA CACGCCCAAC AGGAGCGCAC AACAAGCTAA GCCAGTATTG
GTTTTTTTCT ATGGCGGGAG TTGGGATTCC GGCTCAAAAG AAATGTATTT CTTTGTAGCC
GATGCCTTTA CTCGACTCGG CTATGTGGTC ATTATTCCCG ACTATGCAAA ATATCCTGCA
GCACGTTTCC CGGCGTTTAT GGAAGATGGT GCAGCCGCCA TTGCTTGGAC CAAACAAAAC
GTTGCCAACT ATGGAGGGGA TCCACAAAAA ATATTTATCG CAGGACATTC TGCCGGTGCG
CATCTCGGTG GCCTATTACT GACTGACGAA CGTTACCTGA AGAAGCACGG GCTCAGTCCG
CTGGACGTGC AGGGTTTCTC AGGTTTGGCT GGGCCATATA ACTTTACCCC TACTCGTCCT
AGCCTGATGG AAGTTTTTGG CCCACCTGAG AACTACCCTA ATATGCAGGT AATGAATTTT
GTTAATGGCG ATGAGCCACC GATGCTGCTC TTGCATGGCG CCAAAGATGA CATAGTTGGT
GTTCGTAACC AGGAGCTCTT GATCGAAAAA TTATCCGCCG TGGGCAACCT GTCAACAGGG
GTTTTGTATC CTGGACTAAC TCATACCAGT ATTCTAACCA GCCTGACTTG GCCACTAAAA
AAGAACAGTA GCACCCTCGA CGATATGGAT AAGTTCTTTA AAAGTTTACT CTGA
 
Protein sequence
MAKHSLYAET RPLKIKHIIA SVSLLLLSAC SSTGLFLLNS ALRLNSEHSV SKDVAFGQDE 
WQKLDIYTPN RSAQQAKPVL VFFYGGSWDS GSKEMYFFVA DAFTRLGYVV IIPDYAKYPA
ARFPAFMEDG AAAIAWTKQN VANYGGDPQK IFIAGHSAGA HLGGLLLTDE RYLKKHGLSP
LDVQGFSGLA GPYNFTPTRP SLMEVFGPPE NYPNMQVMNF VNGDEPPMLL LHGAKDDIVG
VRNQELLIEK LSAVGNLSTG VLYPGLTHTS ILTSLTWPLK KNSSTLDDMD KFFKSLL