Gene Ping_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1738 
SymbolfumC 
ID4626703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2116645 
End bp2118015 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content45% 
IMG OID639796919 
Productfumarate hydratase 
Protein accessionYP_943121 
Protein GI119945441 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATT TTAGAATCGA AAGCGACAGT CTGGGGGATA TTGATGTTCC TGTGGACGCT 
ATTTACGGAC CACAAACCCA ACGAGCAATA AACAACTTCC CGATCAGTGG ACTAACCCTC
CCCAAACGCT TTATTCAGGC ATTGGCTTTA CTCAAAAAAT CAGCTGCACA GGCTAATTTA
GAATTAGGTT TGCTCGACCA GAAGAGAGCC GAGGGTATTA TCCACAGCGC AAACTTGATT
GCCTCAGGCA AACATCTGGA TCAGTTTCCT GTTGATGTAT TTCAAACGGG CTCGGGTACC
AGTACCAATA TGAATATGAA TGAGGTGATC GCGATGCTTG CGGGCAACAC CGTCGATGCC
AATGATCACG TTAATATGGG ACAGAGCAGC AACGATGTTA TTCCAAGTAC TATCCATATT
AGTGCCGCTA TTGCTCTCAG TAATCACCTT TTACCTGCCT TAAAGCACTT GCATAAAACC
ATATCAAACA AAGCCGTTAG TGTAAGTGAA CATATTAAAA CCGGGCGTAC TCATCTGATG
GATGCTATGC CGATTAGTAT GGGTCAGGAA CTGTCCGGTT GGGCGGGGCA AATTGAGCAA
GGCATAGAAG GACTGGAATC GGTGCGCAAT CGCTTACATC GTTTAGCCCT GGGCGGCACT
GCAGTGGGAA CCGGCATAAA TACTCATTCG GACTTTGCGC AAACTTTTTG CGCTGCGTTA
ACGAAAGATA CTGGGCTTGA ATTTGAGCCG AGTGATAATT TTTTTGCAAG TTTAGCCGGT
CAAGATGTGG CTGTGGCATT GTCCGGGCAA TTAAAAGTGG TTGCGGTGAG TTTAATGAAG
ATAGCCAATG ATTTACGCTG GATGAACTCG GGCCCGTTAA GCGGCATCGG GGAAATTGAA
CTTGAAGCAT TGCAGCCGGG GTCATCTATT ATGCCGGGTA AGGTAAATCC GGTTATACCT
GAAGCGGTCG CGATGGTATC TGCACAGGTG ATAGGCAATG ATGCAACGAT AACTATTGCG
GGACAATCGG GTAATTTTGA GCTTAACGTC ATGTTGCCTG TGATTGCCTA TAATCTTTTG
GAAAGTGTAG AAATACTGGC GAATTCAGCG AGCTTGTTGG CTGATAAAGC GATCGCAGAT
TTTATTATCA AAACTGATAA GCTGCAACAG TCGTTGGCCC GCAATCCTAT ATTAGTGACC
GCCCTTAACC CTATTATTGG TTATGCAAAA GCCGCTGAAA TTGCCAAAAA GGCTTATCAT
AGTGGCCGAA ATATTATTGA CGTGGCAGAA GAGGAAACGG ATCTCAGTCA TGAGCAATTA
ATTAAAATTT TGGATCCTAT TGCGCTAACC ACAGGCGGTA TTCGTACATA A
 
Protein sequence
MKNFRIESDS LGDIDVPVDA IYGPQTQRAI NNFPISGLTL PKRFIQALAL LKKSAAQANL 
ELGLLDQKRA EGIIHSANLI ASGKHLDQFP VDVFQTGSGT STNMNMNEVI AMLAGNTVDA
NDHVNMGQSS NDVIPSTIHI SAAIALSNHL LPALKHLHKT ISNKAVSVSE HIKTGRTHLM
DAMPISMGQE LSGWAGQIEQ GIEGLESVRN RLHRLALGGT AVGTGINTHS DFAQTFCAAL
TKDTGLEFEP SDNFFASLAG QDVAVALSGQ LKVVAVSLMK IANDLRWMNS GPLSGIGEIE
LEALQPGSSI MPGKVNPVIP EAVAMVSAQV IGNDATITIA GQSGNFELNV MLPVIAYNLL
ESVEILANSA SLLADKAIAD FIIKTDKLQQ SLARNPILVT ALNPIIGYAK AAEIAKKAYH
SGRNIIDVAE EETDLSHEQL IKILDPIALT TGGIRT