Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1738 |
Symbol | fumC |
ID | 4626703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2116645 |
End bp | 2118015 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639796919 |
Product | fumarate hydratase |
Protein accession | YP_943121 |
Protein GI | 119945441 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATT TTAGAATCGA AAGCGACAGT CTGGGGGATA TTGATGTTCC TGTGGACGCT ATTTACGGAC CACAAACCCA ACGAGCAATA AACAACTTCC CGATCAGTGG ACTAACCCTC CCCAAACGCT TTATTCAGGC ATTGGCTTTA CTCAAAAAAT CAGCTGCACA GGCTAATTTA GAATTAGGTT TGCTCGACCA GAAGAGAGCC GAGGGTATTA TCCACAGCGC AAACTTGATT GCCTCAGGCA AACATCTGGA TCAGTTTCCT GTTGATGTAT TTCAAACGGG CTCGGGTACC AGTACCAATA TGAATATGAA TGAGGTGATC GCGATGCTTG CGGGCAACAC CGTCGATGCC AATGATCACG TTAATATGGG ACAGAGCAGC AACGATGTTA TTCCAAGTAC TATCCATATT AGTGCCGCTA TTGCTCTCAG TAATCACCTT TTACCTGCCT TAAAGCACTT GCATAAAACC ATATCAAACA AAGCCGTTAG TGTAAGTGAA CATATTAAAA CCGGGCGTAC TCATCTGATG GATGCTATGC CGATTAGTAT GGGTCAGGAA CTGTCCGGTT GGGCGGGGCA AATTGAGCAA GGCATAGAAG GACTGGAATC GGTGCGCAAT CGCTTACATC GTTTAGCCCT GGGCGGCACT GCAGTGGGAA CCGGCATAAA TACTCATTCG GACTTTGCGC AAACTTTTTG CGCTGCGTTA ACGAAAGATA CTGGGCTTGA ATTTGAGCCG AGTGATAATT TTTTTGCAAG TTTAGCCGGT CAAGATGTGG CTGTGGCATT GTCCGGGCAA TTAAAAGTGG TTGCGGTGAG TTTAATGAAG ATAGCCAATG ATTTACGCTG GATGAACTCG GGCCCGTTAA GCGGCATCGG GGAAATTGAA CTTGAAGCAT TGCAGCCGGG GTCATCTATT ATGCCGGGTA AGGTAAATCC GGTTATACCT GAAGCGGTCG CGATGGTATC TGCACAGGTG ATAGGCAATG ATGCAACGAT AACTATTGCG GGACAATCGG GTAATTTTGA GCTTAACGTC ATGTTGCCTG TGATTGCCTA TAATCTTTTG GAAAGTGTAG AAATACTGGC GAATTCAGCG AGCTTGTTGG CTGATAAAGC GATCGCAGAT TTTATTATCA AAACTGATAA GCTGCAACAG TCGTTGGCCC GCAATCCTAT ATTAGTGACC GCCCTTAACC CTATTATTGG TTATGCAAAA GCCGCTGAAA TTGCCAAAAA GGCTTATCAT AGTGGCCGAA ATATTATTGA CGTGGCAGAA GAGGAAACGG ATCTCAGTCA TGAGCAATTA ATTAAAATTT TGGATCCTAT TGCGCTAACC ACAGGCGGTA TTCGTACATA A
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Protein sequence | MKNFRIESDS LGDIDVPVDA IYGPQTQRAI NNFPISGLTL PKRFIQALAL LKKSAAQANL ELGLLDQKRA EGIIHSANLI ASGKHLDQFP VDVFQTGSGT STNMNMNEVI AMLAGNTVDA NDHVNMGQSS NDVIPSTIHI SAAIALSNHL LPALKHLHKT ISNKAVSVSE HIKTGRTHLM DAMPISMGQE LSGWAGQIEQ GIEGLESVRN RLHRLALGGT AVGTGINTHS DFAQTFCAAL TKDTGLEFEP SDNFFASLAG QDVAVALSGQ LKVVAVSLMK IANDLRWMNS GPLSGIGEIE LEALQPGSSI MPGKVNPVIP EAVAMVSAQV IGNDATITIA GQSGNFELNV MLPVIAYNLL ESVEILANSA SLLADKAIAD FIIKTDKLQQ SLARNPILVT ALNPIIGYAK AAEIAKKAYH SGRNIIDVAE EETDLSHEQL IKILDPIALT TGGIRT
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