| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1704 |
|---|
| Symbol | |
|---|
| ID | 4626458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2078762 |
|---|
| End bp | 2079787 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639796888 |
|---|
| Product | lipolytic enzyme, G-D-S-L family protein |
|---|
| Protein accession | YP_943090 |
|---|
| Protein GI | 119945410 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.135355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0632285 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAA TAAAATACTT TAGAACTATT TGTATACTGT TTTTATTCTC TCTGAGTATA
CTCGTGACAG GGGAGTCAGT TGCCCGGCAA AAACCTTACG ATAGTATTGT GGTGTTTGGT
ACTAGTCTAA GTGATACCGG TAATGCATTT ATTCTATTAT CTGACCCATC ACGTTTTGGC
TTCGATGAAA GTTGCGGTTT AGGTACACCG GTAAATGTCC CGCCTTATGA TAAATTGGAT
GATTTATTAG TACCTGACGG ATCCTATGCC AAAGGTGGCC ATCATGTCAG CAATGGTGGA
ACCTGGATAG AAGAAATGGC ACGCAGTAAA GGGCTGGCCG GATCCGTGCG CCCGACATTG
AGAAATGATG GACTGAAAGC CCGCAATTAT GCGGTCGGAG GTGCAAGGGC ATGGCCAAGA
GAAGGTGATT TTCCCTGCCG CTTCAACTTA TCAGATCAGC TTAATGCATA TCTTGTGGAC
TTTGCAACAG CCTCGGCTGA CACCTTGTTT GTTTTGGAAT TCGGTGCTAA TGATGTGAGG
GATGCATTAG GTTCCCCAGT TCCTTTAGTT GTCATTGAGA GGGCAATTTT TGAGATTTAT
AACACTATCG AAGAGCTTTA TTCTCGAGGT GCCCGCCAGT TTCTATTGAT GAATGTACCT
GATATTGGCC AGACGCCTGC TGTACAAATT TTGGATGGCA GTTTCCCGGA CTTAGACCTG
GCTGTCGCTG CAACCTATTT AACGAATGCA TTTAATGTCG CTCTTCAGGA TCTTCAGGAA
AATCTGAATT CATTTCCCAA TATTGATGTG CGTATTTTTG ATGCGAATGC TCTGCTTAAT
AAAATTATTG CCAATCCTGA TGACTACGGG ATCGAAGTCA CTGATGTTCC CTGCGTAACG
CCAAATGTTC CCCCTTACAA ATGCAAAAAA CCTGATACCT ATTTGTTCTG GGATGGCATA
CATCCGACTA AGGCCGTTCA TAAAATCATG GCGCTTGAAG CTGCTGGAGT TCTTTACACG
CCCTAA
|
|---|
| Protein sequence | MILIKYFRTI CILFLFSLSI LVTGESVARQ KPYDSIVVFG TSLSDTGNAF ILLSDPSRFG
FDESCGLGTP VNVPPYDKLD DLLVPDGSYA KGGHHVSNGG TWIEEMARSK GLAGSVRPTL
RNDGLKARNY AVGGARAWPR EGDFPCRFNL SDQLNAYLVD FATASADTLF VLEFGANDVR
DALGSPVPLV VIERAIFEIY NTIEELYSRG ARQFLLMNVP DIGQTPAVQI LDGSFPDLDL
AVAATYLTNA FNVALQDLQE NLNSFPNIDV RIFDANALLN KIIANPDDYG IEVTDVPCVT
PNVPPYKCKK PDTYLFWDGI HPTKAVHKIM ALEAAGVLYT P
|
|---|
| |