| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1686 |
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| Symbol | pfaC |
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| ID | 4627174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2053687 |
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| End bp | 2059602 |
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| Gene Length | 5916 bp |
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| Protein Length | 1971 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639796875 |
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| Product | polyunsaturated fatty acid synthase PfaC |
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| Protein accession | YP_943077 |
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| Protein GI | 119945397 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACA TTGCAGTCGT TGGTATAGCC AATCTATTTC CCGGTTCAGA TACACCTGAG
ACCTTTTGGC AGCAGTTATT AAAAAAACAG GATAATCGCA GTCAGATAAC CAAGCGGGAG
CTGGGCGTTG AGCCGCAAAA ATATTACGGC AGAAAAGGGG ATATGGACAA ATTTTACTGT
ATGTATGGCG GTTATATCCG GGACTTTGAA TTTGATTCCG GCCCGTTTAT CTCCAAAGGG
TTGAATGAAA CCTACCTTAA TCAGTTAGAC AGTCTTCATC AATGGGGTTT ATATGTCACC
TACCAGGCGT TAATCGATGC GGGTTATTGG GGCAGTGAAA AATTACAGGA TTGCGGGTTG
ATTTTAGGTA ATTTATCTTT TCCAACCAAA ACATCCAACC ATCTTTTTTT GCCCCTTTAT
GGGCATGTGG TTGAAGTTGC CTTAAAACAG TTAACTTCCA GCAGTTTTCA GTTAAGCAAT
TTTAGCGCGG GGCAGACAGT TAACCCCGAT AATGCCCTGA TTGCAGGTTT CCCTTCGGCA
TTATTGTCTC AAGCAGCGGG GCTTGGCGGC AGCGTATTGT CCTTGGATGC CGCCTGCGCA
TCCTCCTGTT ATAGTGTAAA ATTAGCCTGT GATTATTTGC ATACGGGTAA AGCCGATATG
ATGCTTGCGG GCGCGGTGTC AGGCGCGGAT CCGCTCTTTG TTAATATGGG TTTTTCGATT
TTTCAGGCCT TTCCCGAGGA TAATAACCAC GCACCTCTGG ATAAAAACTC TCAGGGTTTA
TTCGCCGCTG AAGGTGCCGG CATGATGGTC TTAAAACGTC ACGCTGATGC TCTACGGGAT
GGTGATAAAA TTCACGCGAT TATTAAGGGT GGCGCACTGT CTAATGACGG TAAAGGTGAG
TTTGTATTAA GCCCTAACAG TAAAGGGCAG ATTCTTGCCT ATCAGCGCGC TTATCAGAAT
GCCAAAGTTA ATCCCGCCGA CGTGGATTAT ATCGAATGCC ACGCCACGGG CACCCCGAAG
GGCGATAAAG TAGAATTAAG CTCCATGGAA ACCTTCTTTA GCCAATACCA CAATAAACCC
TTATTGGGGT CGGCTAAATC AAACCTTGGG CACTTATTAA CGGCGGCGGG CATGCCGGGC
ATGACCAAAG CTATCTGGGC TTTAAATGAA GGTAAAATCC CCGCTACTAT CAGTTTGAAA
AATCCCATGA GCTCTAAAAA CGGCTACTTT GGTGCTGCGC AGATGCCTGT TGATATGGTT
AATTGGCCCG ATACCAAAGA TAAAACCCGC AGCGCAGGTG TCAGTGTTTT CGGTTTTGGC
GGCAGTAATG CCCATCTGGT CTTCCAGCCT GGTAATACGG CCTATGCGCC GAGCAGTGCC
GCGGTTAAAC CTCGCGAGCC GTTAGCGATT GTCGGTATGG ATTGTCACTT TGGCAGCGCC
ACCTGTCTGG CGGAATTTGA CACTTTATTA ACCACCGGGC AGACAACTTT TCGGGAACTG
CCACCCAAGC GTTGGAAAGG GATGGAACAA CACCCAAGCA TTAAACAGAC TTTATTATTG
AATAAAGCCC CCAAGGGTGG ATACATAGAA AACTTTGATA TTGATTTTCT GCGTTTTAAA
GTGCCGCCCA ATAAACAGGA CTGCCTTATT CCACAACAGT TATTAATGAT GAAAGTGGCC
GATAATGCAG CGAAAGATGC GCAGTTAACC CCGGGTAGTA ACGTCGCTGT TCTGGTTGCT
ATGGGGGTTG AACTCGATCT TCATCAGTAT CGCGGCCGGG TTAATTTAAG CACCCAAATT
GAGCAAAGCT TAAAAGAGCA GGGCATTGAA TTATCAGTCG ATCAGCGGTT GACCCTCACC
GGCATCGCTA AAGAAGGGAT CGCCTCGGCG GCGCAGTTAA ATCAATATAC CAGTTTTATC
GGTAATATTA TGGCATCGCG GATTGCCGCG TTATGGGATT TCTCCGGACC GGCCTTTACG
GTTTCCAGTG AAGAAAATTC TGTTTACCGC TGTCTGGAAC TGGCTGAAAA CCTCTTTCAA
ACCTCCGAGG TTGAAGCGGT GCTGATTGCC AGCGTTGATT TAGCGGGCTC ACTGGAAAAT
ATCAGTTTAC GGCAACGTTA TGGTCCAGTT TCTGAAAATG CAACAAACAG ACCCAACCTA
CTAAGTTCAC AACAGTGGTT AGTCGGCGAG GGTGCGGGCG CATTTGTAGT CAAACCGAAT
TCAAAGGCCA ATTCAAATTC GGTTTATGCA ACCGTTGACG GATTAAGTTT TGCAGCGGGC
AGTGATGCGC AGGCCATTGA AAAAGCGGCA CTAAAAGTCT GCCAAATAGC AAACTTAAGC
TGTGCGCAAA TAAACCATGT GGAAGCCTTT GCCAGCGGTT TCAGCCTTGA TAACCAGGCG
GAAAAAAGTG CATTTAATAA ACTTTACCCT TCGATCAAAA TCGACAGTGT TAAACGTCAG
GTAGGGCACT TATTTAATGC ATCCGGCATG GCAAGTATTA TTAAAACGGC TTTACTGCTC
GATAAACAAA AAGCAGGCGT TAATACGGCT ATTAATGGTT TAGGCAAAGA TTTTTGCTGT
GCGCATCTTA TCCTATCGGC AACGGATTCT GCCCGTCAAT CTGCGCCAAA AAACAGTTTA
GGACGAGTCA AAACTCCTTC CTTAGTCAAA ACAATTACGC TTGGGGGGGA TGATATTCAG
CAGGCTATTT TGAAACAGGG TGATAATCCG GTATTTTCAG ATATCAAAAA ACAGCTCGCG
GGTAAAAGTT TACCGCCTGT TAGTGATCCG GTCAGACTTG AGGCTTTACA AATAAATCGT
ACACGCACAG CTCAAAGCAG CTCGCTTGAC AGCGCGCTTG AAAATTTAGC AGTAGCAGAC
AAACCAGCAA CCATTCAAAC AGCGACGTCG ATAAGTCGCG CCGGGGTAAA CGTGGCCAGT
AAAACCAGTA AAGATATTTT TCAGCAGACA AAAACGCATT TGGCATTTAT TCGTTCACGG
CACGCAGCTG AGCAGCAGAT AGGCCAATTA ATCAAACTGC AGGTGCAGTT AACCTCCGCC
AACCCTGTTT TTACTGAACC TGATCAAACG GCAGAAAAAA CACCTTCGGC TTCATTTGAT
TCAATGAAAG AGACAGCAGC GCCACGAATC AAAGCGGTGG AGTCCCCAAG CACCTCGTCT
GCCGGTCTGC AAATCAAGGG CGCAGCCGGT TATGCCTATC CGCCACTGCT GTTGATCGAG
CGTTATAACC AACCGCAAAA GATTATTTAT GACAGTGCCG CGCTGGTGGA GTTTGCTGAA
GGTAATATCG CTAACGTCTT CGGCAGTGAT TATGCTGTTA TCGATAGCTA CGCGCGTCGT
GTGCGTCTGC CAATGACGGA TTATCTGCTG GTCACGCGGG TAACTGATTT AAAGGCTGGC
ATTAATGAAT ATAAAAAATC CTATATGGCA ACGGAATATG ATATTCCAAC CGATGCGCCT
TTTTTAATCG ATGGCCAGAT TCCATGGTCG GTGTCCGTTG AATCGGGTCA GTGTGATTTA
ATGCTGATTT CTTATATCGG CATTGATTTC CAAAATAAAG GGGAACGTGT TTACCGTTTG
CTCGACTGTG AATTAACTTT TTTAGAGGAG ATGGCCTTTG GTGGTGAAAC ATTACGTTAT
GAAATTTATA TCGATTCTTA TGCTAAAAAT GGCGAGCAGT TATTGTTTTT CTTTCATTAC
GACTGTTTTG TTGGGGATAA AAAAGTATTA ATTATGTGTA ACGGTTGCGC CGGTTTCTTT
ACCGATGAGG AGTTAGCCGA CGGTAAAGGC GTGATTCACA ACGATCAGGA TAAAGCGCAG
TTTACAAAAG CTGAAAAATC TTATTTCCAG CCGTTAATTG TCAATCAGCG CAGCCGATAT
GGTTATGAGG AGATGCTTAA ACTGGTTGAC GGTGATATCA GCGGTTGTTT TGGCCCTGAA
TATGATCAGC ATGGCCGTAA TCCGTCGTTA AAATTCTCAT CAAAAAAATT CCTGATGATC
GAGCGAATCA CTAAAATTGA TCCGCAGGGA GGACACTGGG GATTAGGATT ACTTGAAGGG
CAGAAAGATC TCGAACCCGA TCACTGGTAT TTCCCCTGTC ATTTTAAAGG TGATCAGGTG
ATGGCGGGCT CCTTAATGTC TGAAGGTTGC GGACAGATGG CGATGTTCCT GATGCTTTGG
CTGGGTATGA ACAGCAATGT TAATAATGCC CGCTTCCAAC CCATGCCGGG TGAGGCGCAG
ACCGTGCGCT GTCGTGGTCA GGTATTACCG CAGTCAAATA CCCTGACTTA CCGAATGGAA
GTCACCGCAA TGGGGATGTT CCCGCGTCCG TTTATTAAAG CGAATATAGA TATTATTCTT
GATGGCAAAG TAGTGGTTGA TTTTAAAAAC TTGTCTGTTG AAATAAAAGA GCAGGATAAC
AACTCCCCCT GTCCCGTGAC CCTGCCGAAA AATGTTATTC AAATTCCCGG TGCGCCCTTA
AGTCCTTCGG CTATCAGAGC GACGCGCGAT TCCGTCAGTA TTTCTGTTGA TTTGGCGCTT
AGCCGTTTAG AAAAACATTT AGCGGAAATA GACGCCGCGG CCGTTCAAAA AATAAGCAGT
GAACTTGCGG ACGAGCGCGG TATAAACCCC TTTAAACATC CCGAGCGTCC GTTGATGCGT
GTTGAATCAG ATTTTACGGC TTACCGCGAA AAAGGGGTGA TACCGATTAA ACACTTTGCG
GCGCCTATGG TTCACGGACA AAATCGTGTC CCGGATCAAA TCCCCTTTAC CCCCTGGCAT
TTGTTTGAAT TTGCAACAGG TGATATCAGC AAATGTTTTG GCCCTGATTT TGATGTCTAT
CGGGGACGTA TTCCGCCGCG CACCCCTTGT GGTGATTTAC AAGTTGTCAC GCAAGTGGTC
GAGGTTAAAG GCAAACGCTT GGATCTTAAA AATCCCGCCA GCTGCATTGC GCAATATTAT
GTGCCTGCAG ATGCCTGGTA TTTTACCAAA AACAGCCACC CAAACTGGAT GCCCTATGCA
TTGCTGATGG AAATCGCTCT ACAGCCAAAC GGGTTTCTCT CGGGTTATAT GGGCACCACG
CTTAAATATC CGGGCAAAGA GCTTTTCTTC CGTAACCTTG ACGGTAATGG CACGCTCCTA
AAACAAATCG ATTTGCGCGG TAAAACCATT GTTAATAAAT CGGTCTTACT GAGCACCAGC
ACAGCCGGTG GTGCCATTAT TCAAAGTTTC ACTTTTGAAC TGCTGGTCGA TGATCAAGTC
TTCTATACAG GCAACGCCGT ATTTGGCTAC TTCAGCGGCG AATCTTTGAC CAACCAGCTG
GGTATCGATA ACGGTAAGAT CACTCAAGCC TGGTTTGTGG ATCATAAAAC CGCCCCGGAA
CGCATTGAAC GTTTTGATCT GACCGATAAA AAATCGCCGT TATTCAGCGC ACCGGCGGGT
AAACCCTATT ACCGTTTGGC GGGCGGAGAC ATGAACTTTG TGGACAGTGT GTCGATTGTC
GAAGGGGGCG GAAAAGCCGA CTTAGCTTAT ATTTATGGCG AACGTACTAT TGATGAAAGT
GACTGGTTCT TCCGTTACCA CTTTCATCAG GATCCGGTCA TGCCCGGCTC CTTGGGTGTC
GAAGCTATTA TCGAACTGCT GCAGGCTTAT GCATTAAAAA ATGATTTAGG AGCAGGGTTT
AACAATCCCC GTTTTATCAC CCCAAGCACA CAAGTTATCT GGAAATACCG CGGACAAATT
ACCCCGCTTA ATAAACAGAT GAGCCTGGAT GTGCATCTCA CTAAGGTCAT TCGCAATGAG
CATGAAGTGC GTTTAGTCGG GGATGCTAAT TTGTCCAAAG ATGGTCTGCG GATTTATGAA
GTGAAGAATA TCGTATTAAG CATTGTTGAA GCGTAA
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| Protein sequence | MEDIAVVGIA NLFPGSDTPE TFWQQLLKKQ DNRSQITKRE LGVEPQKYYG RKGDMDKFYC
MYGGYIRDFE FDSGPFISKG LNETYLNQLD SLHQWGLYVT YQALIDAGYW GSEKLQDCGL
ILGNLSFPTK TSNHLFLPLY GHVVEVALKQ LTSSSFQLSN FSAGQTVNPD NALIAGFPSA
LLSQAAGLGG SVLSLDAACA SSCYSVKLAC DYLHTGKADM MLAGAVSGAD PLFVNMGFSI
FQAFPEDNNH APLDKNSQGL FAAEGAGMMV LKRHADALRD GDKIHAIIKG GALSNDGKGE
FVLSPNSKGQ ILAYQRAYQN AKVNPADVDY IECHATGTPK GDKVELSSME TFFSQYHNKP
LLGSAKSNLG HLLTAAGMPG MTKAIWALNE GKIPATISLK NPMSSKNGYF GAAQMPVDMV
NWPDTKDKTR SAGVSVFGFG GSNAHLVFQP GNTAYAPSSA AVKPREPLAI VGMDCHFGSA
TCLAEFDTLL TTGQTTFREL PPKRWKGMEQ HPSIKQTLLL NKAPKGGYIE NFDIDFLRFK
VPPNKQDCLI PQQLLMMKVA DNAAKDAQLT PGSNVAVLVA MGVELDLHQY RGRVNLSTQI
EQSLKEQGIE LSVDQRLTLT GIAKEGIASA AQLNQYTSFI GNIMASRIAA LWDFSGPAFT
VSSEENSVYR CLELAENLFQ TSEVEAVLIA SVDLAGSLEN ISLRQRYGPV SENATNRPNL
LSSQQWLVGE GAGAFVVKPN SKANSNSVYA TVDGLSFAAG SDAQAIEKAA LKVCQIANLS
CAQINHVEAF ASGFSLDNQA EKSAFNKLYP SIKIDSVKRQ VGHLFNASGM ASIIKTALLL
DKQKAGVNTA INGLGKDFCC AHLILSATDS ARQSAPKNSL GRVKTPSLVK TITLGGDDIQ
QAILKQGDNP VFSDIKKQLA GKSLPPVSDP VRLEALQINR TRTAQSSSLD SALENLAVAD
KPATIQTATS ISRAGVNVAS KTSKDIFQQT KTHLAFIRSR HAAEQQIGQL IKLQVQLTSA
NPVFTEPDQT AEKTPSASFD SMKETAAPRI KAVESPSTSS AGLQIKGAAG YAYPPLLLIE
RYNQPQKIIY DSAALVEFAE GNIANVFGSD YAVIDSYARR VRLPMTDYLL VTRVTDLKAG
INEYKKSYMA TEYDIPTDAP FLIDGQIPWS VSVESGQCDL MLISYIGIDF QNKGERVYRL
LDCELTFLEE MAFGGETLRY EIYIDSYAKN GEQLLFFFHY DCFVGDKKVL IMCNGCAGFF
TDEELADGKG VIHNDQDKAQ FTKAEKSYFQ PLIVNQRSRY GYEEMLKLVD GDISGCFGPE
YDQHGRNPSL KFSSKKFLMI ERITKIDPQG GHWGLGLLEG QKDLEPDHWY FPCHFKGDQV
MAGSLMSEGC GQMAMFLMLW LGMNSNVNNA RFQPMPGEAQ TVRCRGQVLP QSNTLTYRME
VTAMGMFPRP FIKANIDIIL DGKVVVDFKN LSVEIKEQDN NSPCPVTLPK NVIQIPGAPL
SPSAIRATRD SVSISVDLAL SRLEKHLAEI DAAAVQKISS ELADERGINP FKHPERPLMR
VESDFTAYRE KGVIPIKHFA APMVHGQNRV PDQIPFTPWH LFEFATGDIS KCFGPDFDVY
RGRIPPRTPC GDLQVVTQVV EVKGKRLDLK NPASCIAQYY VPADAWYFTK NSHPNWMPYA
LLMEIALQPN GFLSGYMGTT LKYPGKELFF RNLDGNGTLL KQIDLRGKTI VNKSVLLSTS
TAGGAIIQSF TFELLVDDQV FYTGNAVFGY FSGESLTNQL GIDNGKITQA WFVDHKTAPE
RIERFDLTDK KSPLFSAPAG KPYYRLAGGD MNFVDSVSIV EGGGKADLAY IYGERTIDES
DWFFRYHFHQ DPVMPGSLGV EAIIELLQAY ALKNDLGAGF NNPRFITPST QVIWKYRGQI
TPLNKQMSLD VHLTKVIRNE HEVRLVGDAN LSKDGLRIYE VKNIVLSIVE A
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