Gene Ping_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1588 
Symbol 
ID4625385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1943524 
End bp1943955 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content39% 
IMG OID639796775 
Producthypothetical protein 
Protein accessionYP_942985 
Protein GI119945305 
COG category 
COG ID 
TIGRFAM ID[TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.471565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.423452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAAA GAATATATCA AGCTTATCAG TTACTAAGTA ATGGTGATAA GGCAGATTTG 
AAACGCTGCA ATTTAAAGAA ATTGGCCGAT TCCCCCGCCT ATTTTCGAGT GTTAAAATTC
AGCAGAGCGA AAGATACACC GCAAACACAG CGTATTTTGT ATTTATTGGT TGGCCTTAAA
ATGAGTGATG ATCAGCCAGG CGTGAATGTT GCCAATGCAT TATTAAATGC GGGTGTAAAA
GAGGCGCAAA TCATTCAAAT CACGCGTAGT GGTGATAACG GCATTGATTA CTTAAAACGC
CAGCTAGTAC GCTGTGAAAA TATTAAGCTT GAAAGTATCG GCAAGTTAGC TCAATTTTGG
GGTGACAATG CCCGCCGTAA TCTATTAAAA AACTTCATTT TATCAGCTAA CGATACACAA
ACCGCTAGCT AA
 
Protein sequence
MYQRIYQAYQ LLSNGDKADL KRCNLKKLAD SPAYFRVLKF SRAKDTPQTQ RILYLLVGLK 
MSDDQPGVNV ANALLNAGVK EAQIIQITRS GDNGIDYLKR QLVRCENIKL ESIGKLAQFW
GDNARRNLLK NFILSANDTQ TAS