| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1577 |
|---|
| Symbol | |
|---|
| ID | 4625429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1927621 |
|---|
| End bp | 1929096 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639796765 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_942975 |
|---|
| Protein GI | 119945295 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.443791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.15355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAATT CACAAAAAAG TAAAAAAATC GCAATTATAG GTGGCGGCAT AGCAGGGGCT
TCTGTTGCTT TATATTTAAG TGAAATAGGA CTTGAAGTCA GCTTGTTTGA AAAAGGAACA
AGCTTAGTCA ATGGTCCTCC TATTTGTCAT TTGCATGCTG GTGGTAACTT ATATCGTGAA
ATACCCGATA GCCAATGTGT CACCTTACTA AAAGAGTCTA TTGAAACGCT GCGTTTATTT
CCTGACTCTA TTGATTACCG TCCGACAGTC ATTGCTGTCC CTAAAAGAGA CAGTGGGGAT
GCGCTTGCAT TATTACCTCG TTTAAAAATG CTAACACAGG AATATGAACA ACTCATTCAG
CAAGATGCTA GTAATGAAGT GCTGGGCGCA CCGAAAGATT ATTATCGTTT ATTTGAATTA
GAAGAGATGC AAAAATTAGC AAAGCTCGAT GAAGTCGCAG TACCTAGTAC ATCAGAAGAG
TGGATGATTC CGATTGCTAA GCATGTTGAT TTATCAACCC TTAAATTTCC ATTAGTACTG
GTGCAAGAAT TTGGTTGGAA TGTATTTCGA TTGGGTGCAA GTGCTGCATT ATCATTAGAA
AAGAATCCGA AAAGCAAAAT CCTGCTGAAG ACTAAAGTTA ATCAGTTAAC GCACACAGAA
GGTAAAGGTT GGAAAGTGTT TTTTGAGCAA AACCAACAAG AATCCGTTGA ATATTTTGAT
TACATAATTA ATGCCGCAGG TTTTAAAAGC GGTGAAATAG ACGACGCAGC AGGTTTTCAC
AAGCAACGTA TTGTCGAGTT CAAGGCTGCT TATGTAACGC AATGGGAAGG AACTGGTAGC
TTTTGGCCTG AAGTTATTTT TCACGGTGAG CGGGGCACAC CTCATGGGAT GGCACAGTTT
ACACCTTATC CAGACAACGT AATACAATTG CACGGTATGA CTGAAGAAAT CACCTTATTT
GATGAAGGAC TTATTGCGAA TGATAAAAAC AGTGCGCAAC CTAAGCTAGG CAAGTCTTTT
TTAGATAAAA TTTATAAAGG CTGGTCTTTG GATGAAGTTA AACTACGCAC TGAGCGAGCT
ATTGATTATA TGGCGGAGTT TATACCTAGT TTCTCGAGAG CAAAGGTAAC TGATGTTCCA
TTATTCGGCG CGCAACAAAT ACCTGGTGAT GATGCAAACC TTCGCGCTGC AGGTGTTTCA
TTTGAAGACA ATAACTATGC ACGTTGTGAA ATAGTCAAAG CCTCTTCAGT CTTAACCTGC
GCTGATGAAA TAACAAAACG GTTAATTACA TTAGGTTATG TTAATAAATC GGTTCAAGGT
TGCAGAGAGT TTGCAATTAC TAACTCTATT AGTGATGAGG CAATTACCCA ACGCGCTTTA
ACCTATACCA AACAACGTGG GTATCCAAGT GGATTAGCTT ATCGAAATAT TAAACAAACG
TTTAATCAGA CAGAATTACA AGTGAGTTTT GCTTAA
|
|---|
| Protein sequence | MVNSQKSKKI AIIGGGIAGA SVALYLSEIG LEVSLFEKGT SLVNGPPICH LHAGGNLYRE
IPDSQCVTLL KESIETLRLF PDSIDYRPTV IAVPKRDSGD ALALLPRLKM LTQEYEQLIQ
QDASNEVLGA PKDYYRLFEL EEMQKLAKLD EVAVPSTSEE WMIPIAKHVD LSTLKFPLVL
VQEFGWNVFR LGASAALSLE KNPKSKILLK TKVNQLTHTE GKGWKVFFEQ NQQESVEYFD
YIINAAGFKS GEIDDAAGFH KQRIVEFKAA YVTQWEGTGS FWPEVIFHGE RGTPHGMAQF
TPYPDNVIQL HGMTEEITLF DEGLIANDKN SAQPKLGKSF LDKIYKGWSL DEVKLRTERA
IDYMAEFIPS FSRAKVTDVP LFGAQQIPGD DANLRAAGVS FEDNNYARCE IVKASSVLTC
ADEITKRLIT LGYVNKSVQG CREFAITNSI SDEAITQRAL TYTKQRGYPS GLAYRNIKQT
FNQTELQVSF A
|
|---|
| |