Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1569 |
Symbol | |
ID | 4625421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1919547 |
End bp | 1920236 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639796759 |
Product | hypothetical protein |
Protein accession | YP_942969 |
Protein GI | 119945289 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00144859 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.688354 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATG ATGAAGAGCA TAAGTCACAT CGCGTTGGTT GGTTGCGAGC TGCTGTTTTA GGGGCAAATG ACGGTGTTGT GTCAACGGCG AGCCTTATCA TCGGTATAGC TGCAGCTGGC ACTGGCCAAG AAAACATTCT TATTGCTGGT GCGGCTGGTC TCGTCGCAGG TGCGATGTCT ATGGCTGCTG GTGAATACGT GTCTGTTAGT TCTCAAGCTG ATACAGAGAA CGCCGATTTG GCGCTTGAAA AAAAATCACT ACAAGACAAT TTTTCTTCTG AAAAAGTAGA GTTAGCTCAA ATATACCAAG ACAGAGGGCT TGACCCCCTC CTTGCTGAAC AGGTAGCTGA GCAGCTAATG GCTCACGACG CACTAGGTGC ACATGCTAGA GATGAGATAG GTATCTCAGA TACTGCTAGT GCAAAACCGA TTCAAGCAGC CATTTGTTCA GCGGGTGCAT TTACAATCGG TGCAGCACTG CCTTTATTTG TTGCCTGGAC AACTCCTGAA AACTTCTTAA TATTTGCAGT TGCAGTGTTC TCTCTTACAT TTCTTGCTGT TCTAGGTGGG CTTGCGGCAC AAACAGGTGG TGCGTCAATT AGAGTAGGGG CTTTTAGGGT GATTTTTTGG GGCGCACTTG CAATGGGATT GACCGCAGCA GTCGGTACTA TATTTGGAGT GAGAGTTTAA
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Protein sequence | MSNDEEHKSH RVGWLRAAVL GANDGVVSTA SLIIGIAAAG TGQENILIAG AAGLVAGAMS MAAGEYVSVS SQADTENADL ALEKKSLQDN FSSEKVELAQ IYQDRGLDPL LAEQVAEQLM AHDALGAHAR DEIGISDTAS AKPIQAAICS AGAFTIGAAL PLFVAWTTPE NFLIFAVAVF SLTFLAVLGG LAAQTGGASI RVGAFRVIFW GALAMGLTAA VGTIFGVRV
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