Gene Ping_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1569 
Symbol 
ID4625421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1919547 
End bp1920236 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content47% 
IMG OID639796759 
Producthypothetical protein 
Protein accessionYP_942969 
Protein GI119945289 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00144859 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.688354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATG ATGAAGAGCA TAAGTCACAT CGCGTTGGTT GGTTGCGAGC TGCTGTTTTA 
GGGGCAAATG ACGGTGTTGT GTCAACGGCG AGCCTTATCA TCGGTATAGC TGCAGCTGGC
ACTGGCCAAG AAAACATTCT TATTGCTGGT GCGGCTGGTC TCGTCGCAGG TGCGATGTCT
ATGGCTGCTG GTGAATACGT GTCTGTTAGT TCTCAAGCTG ATACAGAGAA CGCCGATTTG
GCGCTTGAAA AAAAATCACT ACAAGACAAT TTTTCTTCTG AAAAAGTAGA GTTAGCTCAA
ATATACCAAG ACAGAGGGCT TGACCCCCTC CTTGCTGAAC AGGTAGCTGA GCAGCTAATG
GCTCACGACG CACTAGGTGC ACATGCTAGA GATGAGATAG GTATCTCAGA TACTGCTAGT
GCAAAACCGA TTCAAGCAGC CATTTGTTCA GCGGGTGCAT TTACAATCGG TGCAGCACTG
CCTTTATTTG TTGCCTGGAC AACTCCTGAA AACTTCTTAA TATTTGCAGT TGCAGTGTTC
TCTCTTACAT TTCTTGCTGT TCTAGGTGGG CTTGCGGCAC AAACAGGTGG TGCGTCAATT
AGAGTAGGGG CTTTTAGGGT GATTTTTTGG GGCGCACTTG CAATGGGATT GACCGCAGCA
GTCGGTACTA TATTTGGAGT GAGAGTTTAA
 
Protein sequence
MSNDEEHKSH RVGWLRAAVL GANDGVVSTA SLIIGIAAAG TGQENILIAG AAGLVAGAMS 
MAAGEYVSVS SQADTENADL ALEKKSLQDN FSSEKVELAQ IYQDRGLDPL LAEQVAEQLM
AHDALGAHAR DEIGISDTAS AKPIQAAICS AGAFTIGAAL PLFVAWTTPE NFLIFAVAVF
SLTFLAVLGG LAAQTGGASI RVGAFRVIFW GALAMGLTAA VGTIFGVRV