| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1531 |
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| Symbol | |
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| ID | 4626197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 1877756 |
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| End bp | 1878667 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639796730 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_942940 |
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| Protein GI | 119945260 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.585813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.216028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATTT CCGAGCGCCC CTCCAAGCTG AGTTTACCCC AGACTAATCC CGGCGTCGCC
ACGGTGCTGG AATACCTGAT CATTAAATTT CCTTATATTG ATGCTCGGAT TTGGCGACAG
CGAATCACTG ATGGCAAGGT ACACTACCAC GACGGCTCAC TGGTAACGGC ACGATCGCCC
TTTCAACCGC AGCAAAGAAT CTACTATTAC AGGGAAGTCG AAAGCGAGCC CAGCATCCCC
TTTAAGGAAA CGATTTTATT TCAGGATGAG CATATTTTAG TGGCCCATAA ACCCCACTTT
CTAGCGGTCA CCCCCGGTGG TAAATATGTA AATGAATGCC TGCAAAATCG GCTACGACGC
AGCACCGGCA TTGAGGCTTT ACAAACCTTA CACCGCTTGG ATAGAGTGAC AGCCGGCTTA
GTTATGTTCT CTGTTAACCC GGATACCCGC CATCGTTACC ATCAGTTATT TAAAACACGA
CAGATACACA AAAGCTATCA GGCCATTGCC TCAATTAGTG ACGCTGAAAA CCTTACCGGT
CAGGAGTGGG AAATTAAAAA TCGTATCGTG CAGGGCGAAC CACGCTTTCG CATGCGGGTA
ACCGAGGGCG AAGCCAATAG CCACTCGGTG ATTCGATGCT TGCGACAATC TGCGCAGACG
GCGTTATTTG AATTAACCCC CGTTACGGGT AAAACCCATC AATTACGCGT TCATATGCAG
GCACTGGGCT TGCCCATACT GAATGACAAA TACTACCCGC AATTAGAGCC ACTATCAGCG
GATAACTATG CAGCTCCCTT GCAGTTACTG GCAAAGGAGC TGCAGTTTAT TGATCCGGTG
ACTGAGAAGC CAAGGTGCTT TCGTTCTGAC AGTAACTTAT TGCTGCAATC AGATATCGCT
GCAATGACAT AA
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| Protein sequence | MIISERPSKL SLPQTNPGVA TVLEYLIIKF PYIDARIWRQ RITDGKVHYH DGSLVTARSP
FQPQQRIYYY REVESEPSIP FKETILFQDE HILVAHKPHF LAVTPGGKYV NECLQNRLRR
STGIEALQTL HRLDRVTAGL VMFSVNPDTR HRYHQLFKTR QIHKSYQAIA SISDAENLTG
QEWEIKNRIV QGEPRFRMRV TEGEANSHSV IRCLRQSAQT ALFELTPVTG KTHQLRVHMQ
ALGLPILNDK YYPQLEPLSA DNYAAPLQLL AKELQFIDPV TEKPRCFRSD SNLLLQSDIA
AMT
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