Gene Ping_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1452 
Symbol 
ID4624569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1787689 
End bp1788522 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content37% 
IMG OID639796658 
ProductRNA-binding S1 domain-containing protein 
Protein accessionYP_942868 
Protein GI119945188 
COG category[S] Function unknown 
COG ID[COG2996] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA TTGGTGCTTA TAATGAGCTG ACTATTATTA AGCAAGTTGA TTTCGGTGTG 
TACCTTGACG GGCAGGAAGA CGGGGAAATA TTATTACCCC GCCGTTATGT CACCGATGAT
ATGAAAATCG GGCAAACTGT GGTGGTCTTT CTGTATTGTG ATTCAGAAGA TCGTTTGATT
GCTACCACGC AAAAACCAAA AGCGGAAGTG GGGGAATTTA CTTCATTAAA AGTTGTTGAT
ACAAATAGAG CAGGTGCCTT TCTAGATTGG GGGTTACCGA AAGATTTATT AGTCCCTTTT
AATCAGCAAA AAACACCAAT GAAAGAAGGT TATGGATATA TTGTTTATAT TTATCAAGAT
GATATAAGTG AGCGTTTAGT CGCTTCATCA AAATTAGACC GTTTTTTAGA CAAAGAAGAA
GCCAATTATA AAGTGGGCGA TAAAGTCGAT TTATTAATCG CAGAAAGAAG CGATATTGGT
TTTAAAGCGA TTATTAATAA TAAACACTGG GGGGTTCTGT TCCCAAGCGA CGTGTTTGGT
GAGATGGGTA TTGGAAAAAG GTGCAAAGGT TATATCAAGC AAGTACGTGA AGATGGCAAA
ATTGATTTGA CCCTGACACA GATAGGCTAT GGGAAGATTG ATTCATTAGC CGAGCGGGTT
GTCCAAACCC TGAAATTGCA TCAGGGTTAC CTGCAACTGT CGGATAAAAG TTCTCCTGAG
CAAATAGCCA AAATTTTAAA AATGAGTAAA GCTAATTTCA AAAAAGCGAT CGGTCAGTTA
TATCGTAAAA AAGTCATTCA TATTGAAAAT AATGGGATCC GTTTAAACGA ATAA
 
Protein sequence
MIKIGAYNEL TIIKQVDFGV YLDGQEDGEI LLPRRYVTDD MKIGQTVVVF LYCDSEDRLI 
ATTQKPKAEV GEFTSLKVVD TNRAGAFLDW GLPKDLLVPF NQQKTPMKEG YGYIVYIYQD
DISERLVASS KLDRFLDKEE ANYKVGDKVD LLIAERSDIG FKAIINNKHW GVLFPSDVFG
EMGIGKRCKG YIKQVREDGK IDLTLTQIGY GKIDSLAERV VQTLKLHQGY LQLSDKSSPE
QIAKILKMSK ANFKKAIGQL YRKKVIHIEN NGIRLNE