| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1411 |
|---|
| Symbol | |
|---|
| ID | 4626963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1731342 |
|---|
| End bp | 1732814 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639796617 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_942827 |
|---|
| Protein GI | 119945147 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAGTC AAAAGAAACA GGTAAATAAA AGCAGTCAGT TTAATGTTGG AATAGTTGGC
GGTGGTATTG CGGGATCAAG TCTCGCGTTA TATTTAAGTG AATTAGGGAT AAATGTCTCC
TTGCTTGAAA AAGGAGAGGG TTTAGTTAAT GGACCTCCTA TTTGCCATCT GCATGCGGGT
GGCAATTTCT ACCGGGAAAT TTCCGAACAG CAATGTTTGA CGCTCCTTGC GCAGTCGATT
GATCTGTTGC GTTTATATCC CTTTGCAGCC GACTACCGAC CAACGGTATT GGCGGTACCC
AAACATGATG ACGGCACGGT CGATGAGCTG CTCCCGCGTC TGCATAAACT GCAGTTAGAG
TACCAGCGTT TGATTGACGA GAATCCTGAT AATAAAGTGC TCGGTGAAAG CCGGGATTAC
TTTCGTTTAT TTGAACGCGA GCAGCTGGAG GCATTGGCGT TGCAGGAGCC CAGTCAAGAT
CCTCAGAGCT TAGAGCAGTG GATGATTCCC ATTGCTAAAT ATGTTGATTT GGATAAGCTT
AAATTTCCGC TGATCCTGGT TCAAGAATTC GGCTTGAATA CCTTTCGTTT AGGGGCCGGC
TGCACACTCT CTTTGCAGAA AAATCCGCAT TGTCAATTAC TCACCAACTC CTTCGTTACC
AACATTATCG CTTCTGAGAC AGGCCAATCC TGGCTGGTAG ACTACCAACA GGAAGGGGTA
AATAAACAGG CTGAATTTGA TTATTTAATT AATGCAGCGG GTTTTAGAAG CGGTAAGATT
GATGACATGT TAGGTTTTAA ACGCCAGCGG CTGGTCGAGT TTAAGGCAGC TTATATTGCG
CGCTGGTCAG ACTCTGATTG TCTGTGGCCG GAAGTTGTTT TTCATGGAAA ACGGGGTACC
CCTAATGGCA TGGCGCAATT TACGCCTTAT CCCGGCGGCT ACTTTCAGTT GCATGGTATG
ACTGGTGATA TTACCCTGTT CGATGAGGGT TTGGTTAATA GCAGTGAGCA AAGTGCGCAA
CCAAAATTAG CCGAAAAATT TCTCAAAAAA ATCGACTATA AATGGTCCGA GCAGGAGATG
GTTACCCGTA CTGACCGTTC TATAGAACTT CTTGGTTCTT ATATTCCAAG TTTTAAGTCT
GCGAAAATCG GTGCTAAACC CTTATTTGGC GCACAGCAAA TACCCGGCGG CGATCCAACA
TTAAGAGCGA CAGATGTCTC TTTTGTCAAT GAAAGATATG CGCGTTGCGA AGCCGTGAAA
GCCTCTTCTG TTTTAACCTG CGCAGATGAG ATTGTTAAGC AGATGTCCGC TTGTTATTTA
ATCGATCCAA GCATCAAACC GACCCGTTCT TTTCCCGTCA CCCAAAGCAT TAGCGAGGAG
GAAATCAAGG AGCAGGCGGA AAAATCAGCA CAGCGACGTG ATTATCCTTT GCCCTTAGCA
CATCTTAATG TTGCAAAACT TCCATTGACC TAA
|
|---|
| Protein sequence | MESQKKQVNK SSQFNVGIVG GGIAGSSLAL YLSELGINVS LLEKGEGLVN GPPICHLHAG
GNFYREISEQ QCLTLLAQSI DLLRLYPFAA DYRPTVLAVP KHDDGTVDEL LPRLHKLQLE
YQRLIDENPD NKVLGESRDY FRLFEREQLE ALALQEPSQD PQSLEQWMIP IAKYVDLDKL
KFPLILVQEF GLNTFRLGAG CTLSLQKNPH CQLLTNSFVT NIIASETGQS WLVDYQQEGV
NKQAEFDYLI NAAGFRSGKI DDMLGFKRQR LVEFKAAYIA RWSDSDCLWP EVVFHGKRGT
PNGMAQFTPY PGGYFQLHGM TGDITLFDEG LVNSSEQSAQ PKLAEKFLKK IDYKWSEQEM
VTRTDRSIEL LGSYIPSFKS AKIGAKPLFG AQQIPGGDPT LRATDVSFVN ERYARCEAVK
ASSVLTCADE IVKQMSACYL IDPSIKPTRS FPVTQSISEE EIKEQAEKSA QRRDYPLPLA
HLNVAKLPLT
|
|---|
| |