Gene Ping_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1409 
Symbol 
ID4626961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1729543 
End bp1730406 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content40% 
IMG OID639796615 
Productaminoglycoside phosphotransferase 
Protein accessionYP_942825 
Protein GI119945145 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCTTT TAACCTGCAG AGAGTTAATC CGCACAGAGT TAACCGGGAA CGAATTAACC 
TGGATTACTG CACAACAAAG TGATCGGCTC GTGAGCATTG AGCCGCTTGT GCAGGCGCTG
ACCAATGTGG TTTTTTTGTT AACCTTAGCC AATAATAAAA AAATCATTTT CAAACGCTTA
AACCTGAGTG CAAGAGATAT CAGTGATAGA AAGTGTGAAT TCAAGGTTGA TAATCTTGCC
ACGCTTGCAG GTTTGACACC TAAGGTTATT GCCTGTTGCA CGCGCTATAA ATTGCAGGAA
TATTTTGTGG GGAAAGAGTT AAGTTGTTTT CCCGTCAATA AAGAGCTCAT TAATCTGCTC
GCTTTACAGT TGAAAAAAAT TCATCAACTA CCGGCATTGC ATGCCCAACC ACAAAGATTA
AGTCTTACCC TAAAGCAGCT TAAACAAAGA ATAAAGCTGG ACATTGATGA AGCACATTTT
TCTGTTATGT TAAAGCGCGC TATCGCCTTG GACAAAGGCA GTGCTAGAAA TGTTTTGTGT
CATGGTGACT TGTCTTTAAA TAATCTGTTA ATCAATGACT GGCAACAGGT AATGATTTTA
GATTGGGAGT ATGCCACGCT GGCTTGCCCT GCTTATGATT TAGCGTCCTG TATGTGTATA
AATCGCCTGG ATAACCTGCA GCAGGAAAGC TTAATTGCTG CGTATCATCA TTTACACAAT
GCTGATATTT TGATCTCATT ATCTGCACTG CGCAGGGAGT GCAGATTGTA CTTTTCTGTC
TTTAGTTATC TTAATGCCTT GTGGGAAAAG TGTTTTTTAG TCAATGAGAT ATCACAGGCA
GAAGATAAAA CCTCTGGTGC TTAA
 
Protein sequence
MSLLTCRELI RTELTGNELT WITAQQSDRL VSIEPLVQAL TNVVFLLTLA NNKKIIFKRL 
NLSARDISDR KCEFKVDNLA TLAGLTPKVI ACCTRYKLQE YFVGKELSCF PVNKELINLL
ALQLKKIHQL PALHAQPQRL SLTLKQLKQR IKLDIDEAHF SVMLKRAIAL DKGSARNVLC
HGDLSLNNLL INDWQQVMIL DWEYATLACP AYDLASCMCI NRLDNLQQES LIAAYHHLHN
ADILISLSAL RRECRLYFSV FSYLNALWEK CFLVNEISQA EDKTSGA