Gene Ping_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1236 
Symbol 
ID4624503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1541970 
End bp1542767 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content42% 
IMG OID639796449 
Producthypothetical protein 
Protein accessionYP_942665 
Protein GI119944985 
COG category 
COG ID 
TIGRFAM ID[TIGR00950] Carboxylate/Amino Acid/Amine Transporter 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.294327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0827717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGGGAG AAGTGGATCC ATGGTTTTCT GTATTGCTGC GTATCCTGCT TGCGACCTTA 
GTGTTTTTAC CTTTTTTACG CCCCCGTGAA ATTACTTTGC CAGTTGCACT AAAACTAATG
GCCATCGGCG CCGTTCAACT CGGCTTAATG TATGTTTTCT ATTATCAATC GTTCCTCTTT
TTGACGGTCG CAGAAGTGTT GTTATTTACT GTGATGACGC CTATTTATGT CACCTTGATC
AATGATGCCT TTGATCGTCG GTTTAACCGC AATTTTATGT TACCTACTGT TATCGCGACA
GCTGGCGCGG TTGCAATTCG CTATAACGGC GTTGATAGTA ATTTTTTACT GGGATTTGTG
ATGGTGCAGG GGGCGAATCT TTGTTTTGCT GCGGGGCAGG TGGGTTATAA ACGTTTATTG
GCCAGGCACG AACTTGAGCA GAAAACAATT TTCGGATGGT TTTTTATTGG CGCATTGCTG
GTGGCAAGTA TCTGTTATCT GATTTTTGGT AACAGTGAAA AATTACCAAC CACGAATCTA
CAATGGGGAA TACTTATCTA TCTCGGCACG ATTGCCTCGG GTTTGGGATA TTTTGCATGG
AATAAAGGCG CAACCTTAGT CAATGTCGGC GTTCTGGCGG TGATGAATAA TTTGCTTATT
CCTACGGGTA TATTGGTCAA TGTTCTTATT TGGAATCGTG ATGCAGATAT TTTAAGGTTA
AACATTGGCG GGGCGACTAT ATTATTTGCC TTAGTGCTTA ATCAGTGGCT AAGTAAAAGG
GCTAAGTTAG CAACTTAA
 
Protein sequence
MAGEVDPWFS VLLRILLATL VFLPFLRPRE ITLPVALKLM AIGAVQLGLM YVFYYQSFLF 
LTVAEVLLFT VMTPIYVTLI NDAFDRRFNR NFMLPTVIAT AGAVAIRYNG VDSNFLLGFV
MVQGANLCFA AGQVGYKRLL ARHELEQKTI FGWFFIGALL VASICYLIFG NSEKLPTTNL
QWGILIYLGT IASGLGYFAW NKGATLVNVG VLAVMNNLLI PTGILVNVLI WNRDADILRL
NIGGATILFA LVLNQWLSKR AKLAT