Gene Ping_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1223 
Symbol 
ID4624490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1526768 
End bp1527172 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content40% 
IMG OID639796437 
Productsignal-transduction protein 
Protein accessionYP_942653 
Protein GI119944973 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.173685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA AAAAGGTTAT CAGAGTGAGA GACGTGATGG TCAATGCCTA TGTGATGATT 
GATGGTATTG CAACCGTGAA AGAAGGTATT CGACTGGCAC GGGAACATGT TGTAAAAGTG
TTAGTGGTGA ATAAACGTTA CGATGATGAT GAATATGGTA TTGTTTTGAT GAATGATATT
GCTAAGAAAA TTCTGGCACA GAATCGTTCT GTTGAGCGCA GTAATATTTA TGAAATCATG
ACCAAACCTG CGCTATCTGT TGCACCTGAT ATGAATGTTA AATACTGTGC GCGTTTATTT
GAGCGATTTG GTATCAGTCG CGCACCCGTC ATTGAAGATG GCAAAATTAT TGGTATCGTC
AGTTACAACA ATATTGTACT TAACGGTATG GCGTTGGAGG GCTAA
 
Protein sequence
MNQKKVIRVR DVMVNAYVMI DGIATVKEGI RLAREHVVKV LVVNKRYDDD EYGIVLMNDI 
AKKILAQNRS VERSNIYEIM TKPALSVAPD MNVKYCARLF ERFGISRAPV IEDGKIIGIV
SYNNIVLNGM ALEG