| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1210 |
|---|
| Symbol | |
|---|
| ID | 4623761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 1513629 |
|---|
| End bp | 1514639 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639796425 |
|---|
| Product | hydrogenase expression/formation protein HypE |
|---|
| Protein accession | YP_942641 |
|---|
| Protein GI | 119944961 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0706315 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAG CAAGCATTAA AATGGCGCAT GGCAGCGGCG GCCGCCTTTC CAATGAACTT
ATTAATGAGC TGTTTTTTCG GGCCTTTGAC AATCCTATTT TAAAGCAGGC CAACGACGGG
GCTTTATTAA CAATGGACAG TAAGCGCTTG GCTTTCTCCA CGGATTCCTT TGTGGTTAAT
CCGTATTTCT TCCCCGGAGG CAGTATTGGC GATCTTGCCA TTAACGGCAC GGTGAATGAC
ATTGCCATGT GCGGTGCAGT ACCACGGTTT CTCTCCGCAG CCTTTATTCT CGAAGAAGGC
TTGCCTATTA AGCATCTAAA AAAAATAGTT AACAGTATGG CTGATGCTGC ACGGGCGGCA
CAAGTGCAGA TAGTGACCGG CGATACTAAA GTAGTTGAGC GCGGCGCTGC TGATGGCATT
TTTATTAATA CCTCAGGAAT AGGAATTATT CAACACCAGC AGCAGATAGC GCCGCAAAAC
GCACAGGCTG GCGATGTTGT TATTACGAAT GGTTATATCG GTGACCATGG CATTGCCATT
TTGTCACAAC GCGAAGGTTT ATCGTTCGAA ACCACTATTG AATCCGACAC GGCCGCTCTG
CATACCCTGG TCGCCAGCAT ATTAGCGGCT TCTGCCAATA TTCATGTACT ACGCGACCCC
ACCAGAGGCG GCATTGCCGG CACCCTGAAT GAAATAGCCC AGGCCAGCCA AGTGGAAATT
CGTCTTGAGG AGTATGCGAT TCCAATGCGT GATTCAGTGC GCGCCGCCTG CGATCTTTTA
GGACTGGATC CTTTGATTGT CGCCAATGAA GGTAAACTGA TCACCATTGT GCCCTTAGCT
GACAGTGGTA AAGTATTAAA AGCAATGCAG CAGCACCCGC TTGGCAGAGA GAGTGCCATT
ATCGGTCGAG TATTAAATCA ACATATCGGC AAGGTGACCC TTGAAACCAG TATCGGCAGT
TTAAGAGTAG TCGATATGCC GCTGGGCGAG CAATTACCGA GGATCTGTTA A
|
|---|
| Protein sequence | MASASIKMAH GSGGRLSNEL INELFFRAFD NPILKQANDG ALLTMDSKRL AFSTDSFVVN
PYFFPGGSIG DLAINGTVND IAMCGAVPRF LSAAFILEEG LPIKHLKKIV NSMADAARAA
QVQIVTGDTK VVERGAADGI FINTSGIGII QHQQQIAPQN AQAGDVVITN GYIGDHGIAI
LSQREGLSFE TTIESDTAAL HTLVASILAA SANIHVLRDP TRGGIAGTLN EIAQASQVEI
RLEEYAIPMR DSVRAACDLL GLDPLIVANE GKLITIVPLA DSGKVLKAMQ QHPLGRESAI
IGRVLNQHIG KVTLETSIGS LRVVDMPLGE QLPRIC
|
|---|
| |