Gene Ping_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1174 
Symbol 
ID4624472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1464865 
End bp1465434 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content38% 
IMG OID639796388 
Producttransport-associated 
Protein accessionYP_942609 
Protein GI119944929 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.382619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.116131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAA TATTTCTAAG CATCTTTCTT GGTACTCTGC TACTGCTGCA GGGCTGTGCC 
GGTGGTTTAA TTGTAATGGC TGGGACTGCC GTAGCAGTAA GCAGTGATGA GCGCAGTATT
TCTGAGCAGC TAAGTGATGA CTCTTTATCC ATGGATGCCT TATATAAAAT TAATGAACTT
AACATTAATA AGGAAGATAT TCGTATTAAC TTAATCAGTA ATAGCGGTTA TCTGCTGATC
ATAGGCCAAG TGACGAGCCA ACAATGGAGT GAGAAAATAG AGAAACAGTT AAACACCTTG
CCTAATGTAA AAGGTATTTA TAATCAGTTA AGAATTGGTC AACCTATTGG TTTTGCGCAA
CAAAGTATAG ACAGCTGGAT CACTACCAAA GTTAAAGGCA AACTGACCGC AAATGATAAT
GTAAATCCCC TTAAAATAAA AGTGGCAACC GAAAATTCAG AAGTGTTTTT AATTGGTAAA
GTAACGAAAG AGATGGCCGA TCAAGCAACG GGTATCACCC GTCAAGTTAA TGGCGTAAAA
CGAGTAAATC GCGTTTTTCA ACTTAAATAG
 
Protein sequence
MQKIFLSIFL GTLLLLQGCA GGLIVMAGTA VAVSSDERSI SEQLSDDSLS MDALYKINEL 
NINKEDIRIN LISNSGYLLI IGQVTSQQWS EKIEKQLNTL PNVKGIYNQL RIGQPIGFAQ
QSIDSWITTK VKGKLTANDN VNPLKIKVAT ENSEVFLIGK VTKEMADQAT GITRQVNGVK
RVNRVFQLK