Gene Ping_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1109 
SymbolnrdB 
ID4626239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1385206 
End bp1386351 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content38% 
IMG OID639796325 
Productribonucleotide-diphosphate reductase subunit beta 
Protein accessionYP_942546 
Protein GI119944866 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTATA CAACTTTCTC GACAATTCCT AATGATGCAA TGAAGGAACC CATGTTCTTT 
GGCAATCCGG TCAATGTAGC GCGTTATGAC CAACAACGCT TTGCTGTATT TGAAATGTTA
ATTGAAAAGC AGTTATCGTT TTTCTGGCGA CCAGAGGAGA TTGATGTAAG CCGTGACCGT
ATCGATTTTT TAAACTTACC AGATCATGAG CAGCATATTT TCATCTCCAA TCTAAAATAC
CAAACATTAT TAGATTCAAT TCAGGGTCGT AGCCCGAACA TTGCGCTACT ACCTATTGTT
TCATTACCAG AACTTGAAAC TTGGATTGAG ACATGGTCAT TTTCTGAAAC AATTCACAGT
CGCAGTTACA CCCATATTTT ACGTAATCTA TTTACTGAAC CGGCTGAAAT TTTTGAAGAT
ATCGTCACTA ACGTAGAAAT TCAAAAGCGC GCGACGGATA TTTCCGGTTA TTATGATGCT
TTAATCCATG CTACGCAGTT TATGCAACTG CACGGATTGG AACAAACTGA CATTGATTAT
ATCAATCTGG AAAATCAAGT TGAAAAATTA AACCTGCGCG CCATTAAGAA AAAACTTTAC
CTTTGTATCT GCTCTGTTAA TGCGTTAGAA GCCATTCGTT TTTATGTTTC TTTTGCTTGT
TCATTTGCCT TTGCCGAACG TGATCTATTA GAAGGCAATG CAAAAATAAT AAAATTAATT
GCGCGGGACG AAGCCCTTCA CCTCAATTCG ACGCAACAAA TTTTAAACCT TTGGGCTGAT
GGAAAAGATG ATCCTGAAAT GGCTGAGATT GCTATTGAAT GTTTTGCTGA AGGGCGGGAA
ATATTTTTAC AAGCGGCTCA GCAAGAAAAA GATTGGGCTA AGTACCTGTT TAAAGACGGA
TCAATGATTG GCCTAAATGA ACAAATATTG TCCCAATATG TTGAATATAT TGCAAATCTG
CGTATGCAGG CAATTGGTTA TGCCCCTGAG TTTGAAGTTA AGAGTAACCC AATTCCATGG
ATTAATAATT GGCTGGTAAG TGATAACGTA CAGGTTGCTC CGCAAGAGAC AGAAATCAGT
TCCTATCTGG TAGGGCAAAT TGACAGTAAA GTTGACAGTG AAGATCTCAG TACCTTTGAG
TTATAA
 
Protein sequence
MAYTTFSTIP NDAMKEPMFF GNPVNVARYD QQRFAVFEML IEKQLSFFWR PEEIDVSRDR 
IDFLNLPDHE QHIFISNLKY QTLLDSIQGR SPNIALLPIV SLPELETWIE TWSFSETIHS
RSYTHILRNL FTEPAEIFED IVTNVEIQKR ATDISGYYDA LIHATQFMQL HGLEQTDIDY
INLENQVEKL NLRAIKKKLY LCICSVNALE AIRFYVSFAC SFAFAERDLL EGNAKIIKLI
ARDEALHLNS TQQILNLWAD GKDDPEMAEI AIECFAEGRE IFLQAAQQEK DWAKYLFKDG
SMIGLNEQIL SQYVEYIANL RMQAIGYAPE FEVKSNPIPW INNWLVSDNV QVAPQETEIS
SYLVGQIDSK VDSEDLSTFE L