| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1018 |
|---|
| Symbol | |
|---|
| ID | 4624161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1280230 |
|---|
| End bp | 1281318 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639796234 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_942456 |
|---|
| Protein GI | 119944776 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGCA GCAGTATTGG TCAACTCTTT AAAGTCACCA CCTTTGGCGA AAGTCACGGT
GCAGCAATAG GTTGTATTGT GGATGGTATT CCACCAAATT TAGAAATTTG TGAAGCTGAT
CTGCAGCATG ATTTAGACCG GCGTCGCCCC GGGCAGTCAC GTTATACAAC AATGCGCCAG
GAAAAGGATC AAGTTAAGAT TCTTTCCGGC GTTTTTGAAG GTAAAACAAC CGGCAGCAGT
ATCGGTTTAA TGATTGAAAA TACTGATCAG CGTTCCAAGG ATTATTCTGA AATTAAGGAT
TTGTTCCGTC CGGGACATGC CGATTACACT TACCATCAAA AATTTGGACA CCGCGATTAT
CGGGGTGGGG GTCGTTCTTC TGCGCGCGAA ACAGCGATGC GTGTTGCCGC CGGTGCGATT
GCTAAAAAAT ATTTAAATGA ACAGTTTGGT ATTGTTATTC GTGGTTATTT AAGTCAGTTA
GGTGATATTA AAGCCGATTC AATTGACTTG GATGAAGTTG AAAACAATCC CTTTTTCTTC
CCTGATCTGT CTAAAATCAC GCAGCTTGAA GATTATATGA AAGCCCTGAT TAAAGAGGGT
AACTCAGTAG GGGCGAAAGT CACCGTAGTT GCATCGAGTG TGCCCGTTGG TCTGGGCGAG
CCGGTCTTTG ATCGTTTAGA TGCAGAGCTT GCGCATTCAT TAATGAGTAT TAATGCGGTT
AAAGGGGTTG AAATTGGTGA CGGTTTTGCA GCTGTTAGTC AAAAGGGAAC TGAGCATCGT
GATGAAATGA CCCCGGGCGG TTTTTTATCA AACCATGCGG GCGGCATATT AGGCGGAATT
TCAACGGGTC AGGACATTAT CGCCCATATC GCTCTAAAAC CCACCTCAAG TTTAACTATT
CCCGGTCGCA CTATTACCAC CAATGGCGAA GCGACTACCA TGATAACCAA AGGGCGTCAC
GATCCCTGTG TCGGTATTCG CGCAGTGCCC ATTGCAGAAG CACAAATGGC CATTACCTTG
CTTGACCATC TATTGCGTCA TCGCGCACAG AACTTACATG TAACGACCAA TACACCCTTT
ATTAAATAA
|
|---|
| Protein sequence | MAGSSIGQLF KVTTFGESHG AAIGCIVDGI PPNLEICEAD LQHDLDRRRP GQSRYTTMRQ
EKDQVKILSG VFEGKTTGSS IGLMIENTDQ RSKDYSEIKD LFRPGHADYT YHQKFGHRDY
RGGGRSSARE TAMRVAAGAI AKKYLNEQFG IVIRGYLSQL GDIKADSIDL DEVENNPFFF
PDLSKITQLE DYMKALIKEG NSVGAKVTVV ASSVPVGLGE PVFDRLDAEL AHSLMSINAV
KGVEIGDGFA AVSQKGTEHR DEMTPGGFLS NHAGGILGGI STGQDIIAHI ALKPTSSLTI
PGRTITTNGE ATTMITKGRH DPCVGIRAVP IAEAQMAITL LDHLLRHRAQ NLHVTTNTPF
IK
|
|---|
| |