Gene Ping_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1001 
Symbol 
ID4626254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1257484 
End bp1258740 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content38% 
IMG OID639796217 
Productamine oxidase 
Protein accessionYP_942439 
Protein GI119944759 
COG category[R] General function prediction only 
COG ID[COG2907] Predicted NAD/FAD-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.880623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAGCCATTGT AGGAAGTGGT ATTTCGGGAC TTACTTGTGC GCATCTGTTA 
AATGAAAAAC ACGATATCTC TGTTTTTGAA GCAGGGAATT ATATCGGTGG GCATACGGCA
ACTCAGGATA TCCTCTATCA GGGAAAAAAG TGGCGACTTG ATACTGGTTT TATTGTTTTT
AATGATCGAA CCTATCCAAA TTTCGAAAAA TTAATGGCCA AGATTGGTAT CGATAGACTG
GCCACTGAAA TGAGTTTTAG TGTCAGAAAT GAGGATACCG GGCTTGAATA TAGCGGCAGT
AATTTAAACG GTTTATTCGC TCAACGTACT AACCTTTTCA ATCTGAAATT TCTTAAACTG
ATTAAAGAGA TCCTGCGTTT TAATAAATTA TGTCAGTCAG CCTGGGAATC TAAAAAACTA
GACGATAAGA TAAGCTTAGG GTCTTTTTTG GATCAGCAAG GGTTTAGTGA ATATTTTCGT
TCACATTATA TATTACCCAT GGGCGCGGCT ATTTGGTCTG CCAGTCTGCA TGATATGGAA
GCTTTTCCTC TGTATTTTTT TGTGCGTTTT TTTTATAACC ACGGATTATT AACTATTAAT
AATCGTCCGC AATGGTATGT GGTTCCTAAC GGTTCTGATT CTTATGTGGA ACCGTTAATT
AAAGGTTTTG AAGATAAGGT CCATCTTAAT GCGCCAGTCT CTGAAATTTT CCGTGAGAAT
GGCCATATTA AATTAAAAAC AGCAGAGGGT GATTGGCAGA TATTCGATGA AGTGATTCTG
GCATGTCACA GCGATCAAGC GATGTCGATA CTCAAAGACT TAAGTCAGGA TGAACAGGAT
ATCCTAGGTA AAATGGCTTA TCAAAAAAAT GAGGTCGTTC TGCATACCGA TATAAGTATG
TTGCCTAAAA AGAAACTTGC TTGGGCGGCA TGGAATTATC ACTTAAACAG TGATAATGAG
CGGCCTGTTG CGGTGACTTA TAATATGAAT ATATTGCAAA ATCTACCTGC CGATGCACCC
ATTTTTTGCG TTACTTTAAA TCACACTCAG TCGATAGATG CGAATAAAAT TTTAGGGCGG
TTTAACTATT CACATCCGGT TTTTAATCAA GCTTCTATCG ATGCACAAAA AAACAGGTTG
GCTATTTGCG GGAAAAATAA TACCCATTTT GCGGGGGCAT ATTGGTATAA CGGTTTCCAT
GAAGATGGTG TGGAGAGTGC ACTTGATGTG TGCCGCCGTT TTGGTGTTTC TCTTTAA
 
Protein sequence
MKKIAIVGSG ISGLTCAHLL NEKHDISVFE AGNYIGGHTA TQDILYQGKK WRLDTGFIVF 
NDRTYPNFEK LMAKIGIDRL ATEMSFSVRN EDTGLEYSGS NLNGLFAQRT NLFNLKFLKL
IKEILRFNKL CQSAWESKKL DDKISLGSFL DQQGFSEYFR SHYILPMGAA IWSASLHDME
AFPLYFFVRF FYNHGLLTIN NRPQWYVVPN GSDSYVEPLI KGFEDKVHLN APVSEIFREN
GHIKLKTAEG DWQIFDEVIL ACHSDQAMSI LKDLSQDEQD ILGKMAYQKN EVVLHTDISM
LPKKKLAWAA WNYHLNSDNE RPVAVTYNMN ILQNLPADAP IFCVTLNHTQ SIDANKILGR
FNYSHPVFNQ ASIDAQKNRL AICGKNNTHF AGAYWYNGFH EDGVESALDV CRRFGVSL