| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0884 |
|---|
| Symbol | |
|---|
| ID | 4625222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1107987 |
|---|
| End bp | 1108550 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639796087 |
|---|
| Product | DNA-binding transcriptional regulator |
|---|
| Protein accession | YP_942325 |
|---|
| Protein GI | 119944645 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1476] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.334392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA AAAGCTTAAT GAATACAGTC AATTTCTTAA AAAAACATAA TTCTGATAGA
AATATGAAAT TTAACAGCGA GGGTGAACGT ATCGGGACTA GAAACGATAA TGCGCAGGGC
CAAATTGTAA CTAATCGAGT TGATAGCCGC CTTGTCCATA TGACAGTTGA AGATACTGGA
GAGCCTGTTG TTGTTCAGAG AGATCCACTC ACTCGCTGGG AGGATACTCA AACTAGGCAA
CGTTCGTCTA CGAACACGGC TATTAAGGAT GCTAAGTTAC GTAAGGCAGT TATTAATAGT
GTTGTTACTA AATTACTATT TTCTGACATT ACACAAGGAG ATGCCTTAAT TCAGTTACGC
ATACAGGTAC TAGGTTTTAA CCAAGAAAAA TATGCGAAAT TAGTTAATGT TTCTCGTAAA
AAAATTTCTG ATATAGAAAA TAACAGGAGC AACCCAAGCG TTGAAGTTTT GAATAAAGTT
TTTAAGCCTT TTGGTTTAAA TGTAGGTTTG ATCCCAATCT CACCCACTGT ATTGAAAAAT
CTTCTAGATA ATGGCACCAA CTAA
|
|---|
| Protein sequence | MKKKSLMNTV NFLKKHNSDR NMKFNSEGER IGTRNDNAQG QIVTNRVDSR LVHMTVEDTG
EPVVVQRDPL TRWEDTQTRQ RSSTNTAIKD AKLRKAVINS VVTKLLFSDI TQGDALIQLR
IQVLGFNQEK YAKLVNVSRK KISDIENNRS NPSVEVLNKV FKPFGLNVGL IPISPTVLKN
LLDNGTN
|
|---|
| |