Gene Ping_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0869 
Symbol 
ID4624583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1088410 
End bp1091526 
Gene Length3117 bp 
Protein Length1038 aa 
Translation table11 
GC content43% 
IMG OID639796072 
Productacriflavin resistance protein 
Protein accessionYP_942310 
Protein GI119944630 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0434774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGGG TTATTGAGGG GACATTATCA CGTAAACGTG TGGTCCTAAC GTTGTTAGCT 
TTTTTATTGA CCGCGGGTCT TTCTGCTTAT ATTAATATCC CTAAAGAGGC CGAGCCCGAT
GTGCCTATTC CCATTATATA CGTCTCTGTT CGCCATGAGG GGATCTCGCC GGAAGATGCT
GAACGTTTAC TGTTACGTCC CCTAGAGCAG GAATTGCGTG GCATTGAGGG GGTTAAGGAG
ATGAAATCCA CCGCCAGTAG CGACTATGCC TCTATTGTTT TGGAGTTTTA TGTCGGAATT
GATATTAAAG ATGCGTTGAT CAATGTGCGT GAGCAGGTGA ATCAGGCAAA GGGTAAATTG
CCGCAGGAAG GGGATGAGCC GATTGTTAAA CAAGTGACCT TAGCAACGGA AAATCCCGCG
CTCACTATTT TATTATCCGG CAGTGCGCCC GAGCGGGCAA TGGTTATTCT GGCGCGCACT
CTGCGCGATA ATATCGAAGG ATTTGCAGAA GTTTTAGAGG TTAAGATAGG GGGGGATCGT
GAAGAAATGG TGGAGATTTT AGTGGATCCA TTATTAATGG CAAGTTACCG GCTTAATATG
AATGATATCT ACACCTTAGT TTCTCGTAAT AATCGTCTTG TTGCCGCCGG TATCATGGAT
ACCGGTAAGG GGCGTTTTCC TATTAAAGTT CCGTCTGTTT TTTCAACCAT TCAAGATGTC
ATGGCAATGC CGATTAAGGT TAGCGGTGAT CGAGTGCTAA CTTTTGCTGA CGTTGCCCAA
ATTAGGCGCA CCTTTAAAGA TCCCGCTGGC TTTGTCAGAG TTAATGGTTT ACCGACTATC
TCTCTGGAAG TGGTTAAACG TCCGGGTGAA AATATTATTG CGACTGTCGA TAAAGTGAAA
GCCTTTATTG TTGAGAACGA AGTCTTATTG CCGAATAATA TCCACATAAG TTACGCTGGC
GATCGCGCTA AAGATGTAAA AAACATGCTT AACGATCTGC AAAACAATGT CCTTAGCGCA
GTATTATTAG TGGTCATTGT GATCGTTGCT ATTCTTGGCG TTAGAAGTGC AGCGTTGGTG
GGTATCGCTA TTCCCGGTTC CTTTTTAACC GGCATTCTAG TACTTTGGAT GTCCGGCATT
ACGGTTAATA TAGTCGTGTT ATTTGCACTG ATTATGTCCG TTGGTATGTT AGTCGATGGT
GCCATAGTGG TCACCGAATT TGCCGATCGG GAGATGACGG CTGGGACAGA TCGTCATAAT
GCTTACCTTA ATGCTGCCAA GCGCATGGCA TGGCCTATTA TTGCATCAAC AGCCACCACG
CTGGCAGCTT TTGCCCCGTT ATTATTCTGG CCCGGTATTA CCGGTGAATT TATGAAATAC
CTGCCACTCA CGTTAATTGC AACCCTAACG GCTTCTTTGG CGATGGCACT GATCTTTGTG
CCGGTTCTGG GCAGTGTTTT TGGAAAACCG CGCTTATTAT CGACAAAAGA AAAAAATAAT
GCCCTATTGG CAGAAAACGG CAACTTATTA AAATTAACCG GTTTTACTGG TTTCTATGTA
AAAACACTCC ATAAAGCCAT TAAAAGTCCC TGGATCGTCT TGTTTTTGAC CACTGCGGTT
GCCATTTCCG GCGTTGTTTT GTTCGCAAAA TCAAATTTGG GCGTAGAGTT TTTTCCACAG
GTTGAGCCAT CGGGTATTAA TATTAAAGTG CGTTCCTATG GCGATTTTTC AATCGATGAA
CAAGATCAGA TTATGTCTGG TATTGAGCAA AAAATATTAC CACTGCAGGA TGAAATTGAT
ACGCTTTATC TTAAAACGGG TGATACCACG GGGGAATCGA TTGGCAGTAT GCGTCTTAAT
TTAATTGATT GGCAAGACAG GCGCAGTGCA ACGGACATTA TTGCTGATCT ACTTGATCGT
ACAAAAAATC TTCCGGGTAT TGAAATTGAG ATAACAAAAG ATCAGGCCGG CCCACCGGGC
GGTAAGGCCT TACAAATTGA AATAGGCTCA AGGTACCCGG AACTGTTACA GGAAAATGCC
GATAAAATTC GCCATGCGCT GCAGGAAAAA CCGTATTTTG TCAATATTGA AGATGATGGT
GAAAAACCCG GTATTGAATG GCAATTTATC ATTAATCGTG CTGATGCAGC ACGTTATGGG
GCTGATGCTA CTCTGCTGGG AAGTGGCGTG CAGTTCTTAA CCAATGGGTT AATGCTCGGG
AGCTACCGTC CCGATGACGT TGATGACGAG TTAGATATTC GGGTCCGTTA CCCTGAGAAT
GAAAGGACCT TAAGTAAACT TTCAGCACTG CGTTTGCAGA CTCGTGCAGG GCAGGTGCCG
GTCAGTCATT TTGTGGCGCT TATCCCATCC GTAAAACAAT CCTCAATAAA AAAAGTGGAT
AGCCGTATTG TGATGACGGT CAGTGCAGAT ATGGCTGAAG GTTATAACTT AAGTCTTATC
TTACCAGAGC TTGAAAAAGA GTTACTGGGC TTAGCGCTGG ATCCTCGCAT TAGTTTGAAA
GTGCGTGGAG AAAATGAAGA TCAGCAGGAA GCCGCCGCGT TTTTAAAAAA TGCTTTTATG
GTTGCACTGG CGGTGATGGC CCTGATTTTA ATACTGCAAT TTAACTCTTT TTATCAAGCT
TTTTTAATTT TGAGCGCCGT TGTTTTTTCA ACCACAGGGG TCTTTTTCGG GTTGTTTTTA
AGCCAAAGTG CTTTTGGCAT AGTAATGTCA GGCATTGGTG TTATTGCTCT GGCGGGGATA
GTGGTCAACA ATAATATTGT GTTAATTGAT ACTTATAATG TTTTAAAAAA CACTGGGGAA
ACCACTGAGA ATACAATCTT AAGGACCGGG GCACAGCGTA TCAGGCCAGT GTTACTGACC
ACTGTCACCA CTATTTTTGG CTTAATTCCC ATGGTTTTAA AAGTTAATCT TGATTTTTTT
ACACGCAGTA TTGAATTTGG TGCACCTTCT ACTCAATGGT GGGCTCAACT GGCGACTGCG
ATTGCGGGAG GGTTGACCTT TGCAACCTTA TTGACCCTTG TTTTGACACC TTGTTTATTA
ATGATTGGTG TTAATTCATC AGCATATTTT AAGCGCCATA CAACAAAAAA ACAGTAG
 
Protein sequence
MTGVIEGTLS RKRVVLTLLA FLLTAGLSAY INIPKEAEPD VPIPIIYVSV RHEGISPEDA 
ERLLLRPLEQ ELRGIEGVKE MKSTASSDYA SIVLEFYVGI DIKDALINVR EQVNQAKGKL
PQEGDEPIVK QVTLATENPA LTILLSGSAP ERAMVILART LRDNIEGFAE VLEVKIGGDR
EEMVEILVDP LLMASYRLNM NDIYTLVSRN NRLVAAGIMD TGKGRFPIKV PSVFSTIQDV
MAMPIKVSGD RVLTFADVAQ IRRTFKDPAG FVRVNGLPTI SLEVVKRPGE NIIATVDKVK
AFIVENEVLL PNNIHISYAG DRAKDVKNML NDLQNNVLSA VLLVVIVIVA ILGVRSAALV
GIAIPGSFLT GILVLWMSGI TVNIVVLFAL IMSVGMLVDG AIVVTEFADR EMTAGTDRHN
AYLNAAKRMA WPIIASTATT LAAFAPLLFW PGITGEFMKY LPLTLIATLT ASLAMALIFV
PVLGSVFGKP RLLSTKEKNN ALLAENGNLL KLTGFTGFYV KTLHKAIKSP WIVLFLTTAV
AISGVVLFAK SNLGVEFFPQ VEPSGINIKV RSYGDFSIDE QDQIMSGIEQ KILPLQDEID
TLYLKTGDTT GESIGSMRLN LIDWQDRRSA TDIIADLLDR TKNLPGIEIE ITKDQAGPPG
GKALQIEIGS RYPELLQENA DKIRHALQEK PYFVNIEDDG EKPGIEWQFI INRADAARYG
ADATLLGSGV QFLTNGLMLG SYRPDDVDDE LDIRVRYPEN ERTLSKLSAL RLQTRAGQVP
VSHFVALIPS VKQSSIKKVD SRIVMTVSAD MAEGYNLSLI LPELEKELLG LALDPRISLK
VRGENEDQQE AAAFLKNAFM VALAVMALIL ILQFNSFYQA FLILSAVVFS TTGVFFGLFL
SQSAFGIVMS GIGVIALAGI VVNNNIVLID TYNVLKNTGE TTENTILRTG AQRIRPVLLT
TVTTIFGLIP MVLKVNLDFF TRSIEFGAPS TQWWAQLATA IAGGLTFATL LTLVLTPCLL
MIGVNSSAYF KRHTTKKQ