Gene Ping_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0700 
Symbol 
ID4627031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp891355 
End bp891963 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content39% 
IMG OID639795899 
ProductOmpW family protein 
Protein accessionYP_942151 
Protein GI119944471 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.496076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAG CTATTCTATC TGTTGCACTT GTTTCTACCC TTTGTTCTTC TGTTGCTCTT 
GCTCATAATG CTGGTGACTT ATTTGTTCGT GGTGGTGCTG CTATTGTTAT GCCAAATGAA
AGCAGTGATA AAGTGGGTGG CAATGAGTTA AAAATTGATA ATAATACTCA AGCTGCGGCC
ACATTTACTT ATATGACAAC TGATAAAATA GGTATCGAGT TGCTTTTGGC GACACCCTTT
ACACATGATG TTTCTCTAGA TGGCAATAAA GTGGCTGAAG TCTCTCAGTT ACCCCCTTCT
TTGATGGTGC AATACTATTT TGGTCAGCCA GATAGTCAAT TTCGTCCTTA TGTTGGTGCG
GGTCTGAACT ATACTTTTTT CTTTGAAGAA GAAGGGTATG GAGCATTATC TGGAACGGAT
GTTAGCGTAG ATAATTCTCT GGGTGGGGCT GTTCAAGCTG GTTTGGATGT AAAACTTGAT
GAACATTGGT TTGCTAATGT TTCTGTTTGG TATATGGATA TTAATACTGA TGTTCATACC
GCTGTTGGTA CTATCAATAC TGACATTGAT CCCGTGTCTG CTATGTTGGG TCTTGGTTAC
ACTTTTTAA
 
Protein sequence
MMKAILSVAL VSTLCSSVAL AHNAGDLFVR GGAAIVMPNE SSDKVGGNEL KIDNNTQAAA 
TFTYMTTDKI GIELLLATPF THDVSLDGNK VAEVSQLPPS LMVQYYFGQP DSQFRPYVGA
GLNYTFFFEE EGYGALSGTD VSVDNSLGGA VQAGLDVKLD EHWFANVSVW YMDINTDVHT
AVGTINTDID PVSAMLGLGY TF