| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0626 |
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| Symbol | rpoH |
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| ID | 4624732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 807225 |
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| End bp | 808076 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639795826 |
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| Product | RNA polymerase sigma-32 factor RpoH |
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| Protein accession | YP_942078 |
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| Protein GI | 119944398 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.148614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATA CAAACAATTC AATGAGTTTA GTTCCTCAAG GAAGTATTGG AGCTTATGTT
CAATCCGTAA ACCAATTCTC TATGCTAAGT GCAGAGGCAG AAAAAGAACT TGCTGAACGT
TTGTTTCATG AAGGTGACTT AGCGGCCGCC AAAAAACTGG TCATGTCTCA TTTACGTTTT
GTCGTCTATA TCGCAAAAAG TTATGCAGGT TACGGTCTGG CCCAGGCAGA TTTAATTCAA
GAGGGTAATA TTGGCTTAAT GAAAGCCGTT AAACGTTTTG ATCCGTCAGT GGGTGTGCGT
TTAGTCTCTT TTGCTGTGCA TTGGATTAAA GCAGAAATTC ATGAATATGT TATTCGTAAC
TGGCGCATGG TAAAAATTGC AACCACCAAA GCCCAACGTA AATTGTTTTT TAATCTGCGT
AGAGCCAAAA AACGTCTTGG CTGGTTTAGC CATGATGAAG TTGCCACTGT GGCAGAAAAT
TTAAATGTCA GTACTAAAGA TGTCCTGGAA ATGGAGTCAC GCTTAAACGC GCAGGATCAA
TCCTTTGATT TAAGCGACAG TGATGACGAT GAAAGCGGAT TTGCACCGGT GCAATACCTT
GAGGACAAAA GTGCAGATGT TTTTCAGGTA GTCGCCACTG AGAATACTCA GCTGCACACC
AAAAATAAAC TTTATTCGGC ACTTTCAACG CTTGATGAAC GTAGCCAGGA TATCGTAAGC
TCGCGCTGGT TAAGTGAACC TAAAGCAACA CTGCATGACT TGGCTGCCCG ATATGGTATT
TCAGCAGAAC GTATTCGCCA GCTAGAAGAA AATGCGATGA AAAAGCTACA ATCTAATATG
GATTTAGACT AA
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| Protein sequence | MKNTNNSMSL VPQGSIGAYV QSVNQFSMLS AEAEKELAER LFHEGDLAAA KKLVMSHLRF
VVYIAKSYAG YGLAQADLIQ EGNIGLMKAV KRFDPSVGVR LVSFAVHWIK AEIHEYVIRN
WRMVKIATTK AQRKLFFNLR RAKKRLGWFS HDEVATVAEN LNVSTKDVLE MESRLNAQDQ
SFDLSDSDDD ESGFAPVQYL EDKSADVFQV VATENTQLHT KNKLYSALST LDERSQDIVS
SRWLSEPKAT LHDLAARYGI SAERIRQLEE NAMKKLQSNM DLD
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