Gene Ping_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0580 
Symbol 
ID4624135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp759294 
End bp760088 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content44% 
IMG OID639795781 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_942033 
Protein GI119944353 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA TCAGCGTTTC TCGTCTGACT AAAATGAAAC AAGACAATCA AAAAATCACC 
TGCATGACCG CATATGATGC GAGTTTTGCA GCTATTTTTG ACCAGGCCGG TATCCAAGTA
TTATTAGTAG GTGACTCACT CGGCATGGTA TTACAGGGAC ATGATTCTAC GCTGCCAGTG
ACAGTTGACG ATATCAGATA CCATACAGCT GCGGTTGTAA GTACCGCTAA AAGTGCATTC
ATTATCGCTG ATTTACCCTT TATGAGTTAT TCAACGCCAG AAATGAGCTA TGAAAATGCC
GCAATATTAA TGCGTGCAGG CGCTAATATG GTAAAAATGG AGGGCGGCGA ATGGCTCACT
GATTCCGTAA AAGGATTAGT GGAACGTGGT ATTCCAGTCT GTGGTCACCT TGGTTTAACA
CCACAATCGG TCAATATTTT TGGTGGTTAC AAAGTACAAG GACGCGAGGA AGAACAGGCA
GACGAGCTGC TCAACGACGC ATTATTGCTC CAGGAAGCAG GGATACAACT GTTAGTTCTA
GAATGCGTTC CGGTCAGTTT AGCCGATCGC ATTACGACAG CCTTAAAAAT TCCAGTGATT
GGGATTGGAG CAGGGTGTGA AACCGACGGA CAAATTTTAG TGATGCATGA TGCCTTTGGT
GTCTCGGCTG GTTTTTGTCC AAAATTTTCC AAAAACTTCC TGCTTGAAAC AGGCGATATT
CGCCAGGCGG TAACGCTTTA TATAGATCAA GTTGAAAGCA GACAATTCCC GTCTGCTGAA
CACAGTTTTT ATTAA
 
Protein sequence
MAKISVSRLT KMKQDNQKIT CMTAYDASFA AIFDQAGIQV LLVGDSLGMV LQGHDSTLPV 
TVDDIRYHTA AVVSTAKSAF IIADLPFMSY STPEMSYENA AILMRAGANM VKMEGGEWLT
DSVKGLVERG IPVCGHLGLT PQSVNIFGGY KVQGREEEQA DELLNDALLL QEAGIQLLVL
ECVPVSLADR ITTALKIPVI GIGAGCETDG QILVMHDAFG VSAGFCPKFS KNFLLETGDI
RQAVTLYIDQ VESRQFPSAE HSFY