Gene Ping_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0578 
Symbol 
ID4624133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp757829 
End bp758209 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content41% 
IMG OID639795779 
Productaspartate 1-decarboxylase 
Protein accessionYP_942031 
Protein GI119944351 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0853] Aspartate 1-decarboxylase 
TIGRFAM ID[TIGR00223] L-aspartate-alpha-decarboxylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CAATGCTTAC AGGCAAACTC CACCAAGCGA GAGTGACACA CGCCGAATTA 
AATTATGAAG GTTCATGCGC TATCGATCAA GACCTCCTTG AGCAAGCTGG TATTCTAGAA
TACGAGCAGA TTGAAATTTA CAATATCGAA AATGGTGCGC GTTTTTCAAC CTACGCTATT
ACCGGCGAAC GAGGTTCAAA AATGATATCT GTTAATGGTG CCGCAGCGCG TCTGGCAGCG
GTAGGCGATC GCGTAATAAT CTGTACCTAC GCGAGTTTAA ATGCAGCGGA AATTGTAAAT
CATAAACCAA GTTTAGTGTA TTTAGATGCG CAAAATAATA TTGTACGTAC GAGTAAAGAC
GTACCAGTAC AAGTTGCTTA A
 
Protein sequence
MKKTMLTGKL HQARVTHAEL NYEGSCAIDQ DLLEQAGILE YEQIEIYNIE NGARFSTYAI 
TGERGSKMIS VNGAAARLAA VGDRVIICTY ASLNAAEIVN HKPSLVYLDA QNNIVRTSKD
VPVQVA