Gene Ping_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0549 
Symbol 
ID4623736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp700826 
End bp701812 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content44% 
IMG OID639795745 
ProductABC oligopeptide/dipeptide transporter ATP-binding protein 
Protein accessionYP_942002 
Protein GI119944322 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase
[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.824636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATA CCTTAAAAAG TCCAGAAGTA ATACTTTCAG TTAAAAACAT GGTCAAAGAT 
TTTCCCACGG GTCAATCCAA TAGCAAAAAA AAGATGATGC GCGCCGTTAA TGAAGTTTCA
TTTGATTTAT GTAAAGGCGA AGCGCTGGCT ATTGTTGGTG AATCAGGATC GGGTAAGAGC
ACCGGCGCAC GCATTTTATC GCGAATTTAC GATAAGACAG CAGGCGAGAT CATGTTCAAA
GGTCAGCCGC TAGATGAGTA TGTTAAAGAG CATGGTAGCC TGGATTATGC GCGCCAGGTG
CAGATGATTT TCCAGGACCC TTTTGGATCG CTGAATCCTG TGCATTCTAT TTTCCACCAT
ATTGCACGCC CGCTGCTTAT TCATAAGCGG GCAAATAAGG AAAATCTTGA GAAAGTGGTA
TATGGGCTTC TTGAATTAGT CGGTTTACAA CCTGCGGTTG AGACAGCAGA AAAATACCCG
CATGAGTTAA GCGGTGGGCA AAGGCAACGT GTTGCTATTG CCCGCGCGTT AGCAGTGGAC
CCTGAAGTTA TTTTAGCTGA TGAACCTATT TCAATGCTGG ATGTCTCGGT ACGTTTGGGT
ATTTTAAATT TAATGAGCGA TCTTAAAGAT AAACACGGTA TCTCATTTAT GTACATTACC
CATGATATCG CCACCGCGAG ATATTTTGCA GAAAAAACAG CGGTTATGTA TGTCGGTCAT
ATGGTGGAGT GGGGCAGTAG CGATAACGTG ACGCAAACCC CTCAGCATCC GTACACACAA
TTACTGCTAT CTGCGGTTCC CGAAGCGGGT AAAAGTGGTC GTCGTGAGTT AGATGCCAAA
AAAGGCGAAA TTCCATTATG GAAACCGGAC TCTAAAGGTT GTCCATTTGC CATGCGCTGT
CCGCGTGTTT TAGATAAATG CAGCGACAGT TTTCCCGCGA TCACGCAAAT AGCAGATGAT
CATTTCATCC GATGTTTTAA TATCTAA
 
Protein sequence
MMDTLKSPEV ILSVKNMVKD FPTGQSNSKK KMMRAVNEVS FDLCKGEALA IVGESGSGKS 
TGARILSRIY DKTAGEIMFK GQPLDEYVKE HGSLDYARQV QMIFQDPFGS LNPVHSIFHH
IARPLLIHKR ANKENLEKVV YGLLELVGLQ PAVETAEKYP HELSGGQRQR VAIARALAVD
PEVILADEPI SMLDVSVRLG ILNLMSDLKD KHGISFMYIT HDIATARYFA EKTAVMYVGH
MVEWGSSDNV TQTPQHPYTQ LLLSAVPEAG KSGRRELDAK KGEIPLWKPD SKGCPFAMRC
PRVLDKCSDS FPAITQIADD HFIRCFNI