Gene Ping_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0520 
Symbol 
ID4624832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp662484 
End bp663221 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content39% 
IMG OID639795716 
Productpirin domain-containing protein 
Protein accessionYP_941973 
Protein GI119944293 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA GCCATCAAAA AATCAGTGCA TCTGAATTAT ATTATTTACC GAGTAGCAGT 
ATGCATCCGG CAAATACCCG TTTTCATTTT TCATTTGCTA ATTATTACAA CCCGACAAGA
ATGAACTTTG GCGCACTGCG TGTTTTAAAC GATGATGATG TCACCCCGCA CAGTGGATTT
GGCCGTCACC CGCACAGGGA TATGGAGATT GTCAGTTATA TAGTTAAAGG TCAATTAACC
CATTGGGATA GTGTCACCAA CGTCGAAGAG ACCATTGGCC GTGGCCATGT TCAGGCTATT
TCAGCGGGTT CGGGTATATC GCATTCAGAG CTTAATAAGC AGAATGATTG GTGTCGATTT
TTACAAATTT GGATTATGCC CTCGAAAAAG GGAGGGCCTG TTCGTTACCA TCACCAACAA
TTTGAATTAC AGGAAAGAGA AAATAAACTA TTACATATTG TTGGTAATCC AAAAAATAAA
AACACCTCCC CTTTGTATCT CAATTCAGAT GTTAATTTAT ATGTATCTGA ACTAACCGAT
TCGCGCGCTA TTGTCGAATT TGAATTACAA CCGGGCAGGC AGGCTTATAT TAATTGTATT
GAAGGCAGTA TCAATATTGA AGGTTACCCG TTACTTAATG AACGCGACTC ACTGGAATTA
AGTGCTGCCG GAAAGATTAA TTTTTCACTG CAGGGATCTC ATGCGCATTT CATTATTATA
GAAATGGAAA GTCATTGA
 
Protein sequence
MKASHQKISA SELYYLPSSS MHPANTRFHF SFANYYNPTR MNFGALRVLN DDDVTPHSGF 
GRHPHRDMEI VSYIVKGQLT HWDSVTNVEE TIGRGHVQAI SAGSGISHSE LNKQNDWCRF
LQIWIMPSKK GGPVRYHHQQ FELQERENKL LHIVGNPKNK NTSPLYLNSD VNLYVSELTD
SRAIVEFELQ PGRQAYINCI EGSINIEGYP LLNERDSLEL SAAGKINFSL QGSHAHFIII
EMESH