Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0520 |
Symbol | |
ID | 4624832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 662484 |
End bp | 663221 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639795716 |
Product | pirin domain-containing protein |
Protein accession | YP_941973 |
Protein GI | 119944293 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAA GCCATCAAAA AATCAGTGCA TCTGAATTAT ATTATTTACC GAGTAGCAGT ATGCATCCGG CAAATACCCG TTTTCATTTT TCATTTGCTA ATTATTACAA CCCGACAAGA ATGAACTTTG GCGCACTGCG TGTTTTAAAC GATGATGATG TCACCCCGCA CAGTGGATTT GGCCGTCACC CGCACAGGGA TATGGAGATT GTCAGTTATA TAGTTAAAGG TCAATTAACC CATTGGGATA GTGTCACCAA CGTCGAAGAG ACCATTGGCC GTGGCCATGT TCAGGCTATT TCAGCGGGTT CGGGTATATC GCATTCAGAG CTTAATAAGC AGAATGATTG GTGTCGATTT TTACAAATTT GGATTATGCC CTCGAAAAAG GGAGGGCCTG TTCGTTACCA TCACCAACAA TTTGAATTAC AGGAAAGAGA AAATAAACTA TTACATATTG TTGGTAATCC AAAAAATAAA AACACCTCCC CTTTGTATCT CAATTCAGAT GTTAATTTAT ATGTATCTGA ACTAACCGAT TCGCGCGCTA TTGTCGAATT TGAATTACAA CCGGGCAGGC AGGCTTATAT TAATTGTATT GAAGGCAGTA TCAATATTGA AGGTTACCCG TTACTTAATG AACGCGACTC ACTGGAATTA AGTGCTGCCG GAAAGATTAA TTTTTCACTG CAGGGATCTC ATGCGCATTT CATTATTATA GAAATGGAAA GTCATTGA
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Protein sequence | MKASHQKISA SELYYLPSSS MHPANTRFHF SFANYYNPTR MNFGALRVLN DDDVTPHSGF GRHPHRDMEI VSYIVKGQLT HWDSVTNVEE TIGRGHVQAI SAGSGISHSE LNKQNDWCRF LQIWIMPSKK GGPVRYHHQQ FELQERENKL LHIVGNPKNK NTSPLYLNSD VNLYVSELTD SRAIVEFELQ PGRQAYINCI EGSINIEGYP LLNERDSLEL SAAGKINFSL QGSHAHFIII EMESH
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