| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0413 |
|---|
| Symbol | |
|---|
| ID | 4623829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 525055 |
|---|
| End bp | 525708 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639795610 |
|---|
| Product | ABC polar amino acid transporter inner membrane protein |
|---|
| Protein accession | YP_941873 |
|---|
| Protein GI | 119944193 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.739414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.151387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAGT GGCAGATTAT TTGGGAAGCT CGAGAGCTGA TTTCTTCTGG ACTAATGAAT
ACCTTGTATC TGGTTCTGAT TAGCATGGCT CTGAGCATCC CTCTGGGAGC TTTAGCCGCA
ATCGTAGTCA TTGAATCTCC CGGATGGCGT AAAATTTTCC AAGAATTTTT TGACCTACTA
CGTTGCGTGC CATTTTTATT GCTAGCCTAT GTGATGTACT ACGGTTTACC TTCTTTGGGA
GTGCGCCTGA GCCCTTGGGA ATCAGGGATT GTTACACTGG TTCTGTATAA TATGGCTTAC
TTCGTAGAAA TATTCGTCAC GGCTTATAAA GCTATCAGTC GTGCCGACGT AGAAGCAGCG
GATGCCTATG GTTTTTCGTC ATTGCAAAAA TACAGGCACG TTATTTTTCC TCAAATTGTG
CTGATATCAG CTCCATTGGT TGGCAATCAG ATCATTACAG CAATGCGCGA CAGTGCCCTG
CTTATGATTA TTACTGTTCA GGAACTCACT TTCGCTGCGA ATTTTATTAG TGTTAATCAC
TTTATCCCCT TTCTACCTTT TGTTGTCGCT GTTGCGCTTT ATACGCTGAT AACTTTAGTG
GTTGAGAGGG GGGTTGCAAG TATATCTAAT GTAAGGAAAC GTTGTTATGG ATGA
|
|---|
| Protein sequence | MDQWQIIWEA RELISSGLMN TLYLVLISMA LSIPLGALAA IVVIESPGWR KIFQEFFDLL
RCVPFLLLAY VMYYGLPSLG VRLSPWESGI VTLVLYNMAY FVEIFVTAYK AISRADVEAA
DAYGFSSLQK YRHVIFPQIV LISAPLVGNQ IITAMRDSAL LMIITVQELT FAANFISVNH
FIPFLPFVVA VALYTLITLV VERGVASISN VRKRCYG
|
|---|
| |