Gene Ping_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0304 
Symbol 
ID4623723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp399941 
End bp401536 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content40% 
IMG OID639795501 
Productisocitrate lyase 
Protein accessionYP_941769 
Protein GI119944089 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATA ATACTGAAAA AACTAATGCT AGCAATGTTA TTGCACAACA GGGTGATGCT 
TGGAAGGCGA TTAATCCTGA GTATGTTGCC CGTTTGCGCT CACAAAACCG CTTTAAAACA
GGTATTGATA TTGCTAAATA TACAGCGAAG ATAATGCGCG AAGATATGGA TTCATATGAT
ATCGACAGTA AAAATTATAC TCAGTCTCTA GGTTGCTGGC ATGGATTTGT CGGTCAGCAA
AAAATGATCT CTATTAAAAA GCATTTTACG ACGACTAAAG GTACTTATTT ATACCTTTCC
GGTTGGATGG TTGCGGCAAT GCGCTCTGAA TTTGGCCCGC TTCCTGATCA GTCAATGCAT
GAAAAGACCA GTGTTCCGTT GTTAATAGAA GAGCTTTATA CTTTCTTAAA ACAAGCTGAT
GCCCGTGAAC TTGGTCATGT CTTTCAAGAG TTAGATGCAG CCAATGATAA AGGTGATCAA
GTAGCAGCGC AGGCGGCTCT AAAGAAAATC AATGAATTTG AAACACATGT TGTGCCGATT
ATCGCCGATA TTGATGCGGG TTTTGGTAAT GAAGAAGCAA CTTACCTACT AGCTAAAAAA
ATGATTGAAG CCGGTGCTTG TTGTATTCAG ATTGAAAACC AGGTATCCGA TGCTAAACAG
TGTGGTCACC AGGATGGCAA AGTAACTGTC CCGCATGAAG ACTTCCTCGC TAAGATTAAT
GCAGTACGTT ATGCATTTAT GGAGTTGGGT GTTGACGATG GCGTTATTGT TGCGCGAACT
GATTCTTTAG GTGCTGGTTT AACTCAAAAA ATTCCAGTAT CCCAAGAGCC AGGCGATCTT
GCTGATCAGT ATAATAACTA TATTGACGGC GAAGTAATCA ACTCTTTAGA TCAGTTGAAA
TCGGGAGATC TCGTACTGAG TCGTGGTGGA GAATTGATTA TACCAAACCG TTTAGCCAAT
GGCCTGGTAC GTTTTAAACC TGATACTGGC GAAGACAGAG TAGTACTTGA TTGTATTACT
TCTCTACAAA ATGGTGCTGA TTTATTGTGG ATTGAAACGG AACAACCTAA CGTTGGGCAA
ATTGCTGGTA TGGTTAACCG TATCCGCGAA GCGGTTCCAA ATGCCAAGCT TGTTTATAAT
AACAGTCCAT CATTTAACTG GACATTAAGC TTTAGACAGC AGATTTTTGA TACTTGGAAT
AAAGATGGTA TTGATGTTTC AGCTTATAAC CGTGCAGATT TGATGAGCCC AATCTATGAT
GAGACTAAAT TAGCTCTTGA AGCTGACCAA CAAATTCAGA ACTTCCAGAA AGATGCGGCA
AGAGAAGCAG GTATTTTCCA TCACTTGATA ACTTTACCGA CTTACCATAC TGCAGCTTTG
TCGACTGATA ATCTTGCTAA AGATTACTTT GGTGAAATGG GTATGCTGGC TTATGTTAAA
AATGTACAGA GAGAAGAAAT TCGTCAGGGT CTTGCATGTG TAAAACATCA GGATATGTCC
GGCTCTAATA TGGGCGATGA TCACAAAGAA TATTTCTCTG GAGAGCAGGC GCTGAAAGCT
TCTGGTGAAA ATAATACGAT GAGTCAATTT TCATAA
 
Protein sequence
MNYNTEKTNA SNVIAQQGDA WKAINPEYVA RLRSQNRFKT GIDIAKYTAK IMREDMDSYD 
IDSKNYTQSL GCWHGFVGQQ KMISIKKHFT TTKGTYLYLS GWMVAAMRSE FGPLPDQSMH
EKTSVPLLIE ELYTFLKQAD ARELGHVFQE LDAANDKGDQ VAAQAALKKI NEFETHVVPI
IADIDAGFGN EEATYLLAKK MIEAGACCIQ IENQVSDAKQ CGHQDGKVTV PHEDFLAKIN
AVRYAFMELG VDDGVIVART DSLGAGLTQK IPVSQEPGDL ADQYNNYIDG EVINSLDQLK
SGDLVLSRGG ELIIPNRLAN GLVRFKPDTG EDRVVLDCIT SLQNGADLLW IETEQPNVGQ
IAGMVNRIRE AVPNAKLVYN NSPSFNWTLS FRQQIFDTWN KDGIDVSAYN RADLMSPIYD
ETKLALEADQ QIQNFQKDAA REAGIFHHLI TLPTYHTAAL STDNLAKDYF GEMGMLAYVK
NVQREEIRQG LACVKHQDMS GSNMGDDHKE YFSGEQALKA SGENNTMSQF S