Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0304 |
Symbol | |
ID | 4623723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 399941 |
End bp | 401536 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639795501 |
Product | isocitrate lyase |
Protein accession | YP_941769 |
Protein GI | 119944089 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTATA ATACTGAAAA AACTAATGCT AGCAATGTTA TTGCACAACA GGGTGATGCT TGGAAGGCGA TTAATCCTGA GTATGTTGCC CGTTTGCGCT CACAAAACCG CTTTAAAACA GGTATTGATA TTGCTAAATA TACAGCGAAG ATAATGCGCG AAGATATGGA TTCATATGAT ATCGACAGTA AAAATTATAC TCAGTCTCTA GGTTGCTGGC ATGGATTTGT CGGTCAGCAA AAAATGATCT CTATTAAAAA GCATTTTACG ACGACTAAAG GTACTTATTT ATACCTTTCC GGTTGGATGG TTGCGGCAAT GCGCTCTGAA TTTGGCCCGC TTCCTGATCA GTCAATGCAT GAAAAGACCA GTGTTCCGTT GTTAATAGAA GAGCTTTATA CTTTCTTAAA ACAAGCTGAT GCCCGTGAAC TTGGTCATGT CTTTCAAGAG TTAGATGCAG CCAATGATAA AGGTGATCAA GTAGCAGCGC AGGCGGCTCT AAAGAAAATC AATGAATTTG AAACACATGT TGTGCCGATT ATCGCCGATA TTGATGCGGG TTTTGGTAAT GAAGAAGCAA CTTACCTACT AGCTAAAAAA ATGATTGAAG CCGGTGCTTG TTGTATTCAG ATTGAAAACC AGGTATCCGA TGCTAAACAG TGTGGTCACC AGGATGGCAA AGTAACTGTC CCGCATGAAG ACTTCCTCGC TAAGATTAAT GCAGTACGTT ATGCATTTAT GGAGTTGGGT GTTGACGATG GCGTTATTGT TGCGCGAACT GATTCTTTAG GTGCTGGTTT AACTCAAAAA ATTCCAGTAT CCCAAGAGCC AGGCGATCTT GCTGATCAGT ATAATAACTA TATTGACGGC GAAGTAATCA ACTCTTTAGA TCAGTTGAAA TCGGGAGATC TCGTACTGAG TCGTGGTGGA GAATTGATTA TACCAAACCG TTTAGCCAAT GGCCTGGTAC GTTTTAAACC TGATACTGGC GAAGACAGAG TAGTACTTGA TTGTATTACT TCTCTACAAA ATGGTGCTGA TTTATTGTGG ATTGAAACGG AACAACCTAA CGTTGGGCAA ATTGCTGGTA TGGTTAACCG TATCCGCGAA GCGGTTCCAA ATGCCAAGCT TGTTTATAAT AACAGTCCAT CATTTAACTG GACATTAAGC TTTAGACAGC AGATTTTTGA TACTTGGAAT AAAGATGGTA TTGATGTTTC AGCTTATAAC CGTGCAGATT TGATGAGCCC AATCTATGAT GAGACTAAAT TAGCTCTTGA AGCTGACCAA CAAATTCAGA ACTTCCAGAA AGATGCGGCA AGAGAAGCAG GTATTTTCCA TCACTTGATA ACTTTACCGA CTTACCATAC TGCAGCTTTG TCGACTGATA ATCTTGCTAA AGATTACTTT GGTGAAATGG GTATGCTGGC TTATGTTAAA AATGTACAGA GAGAAGAAAT TCGTCAGGGT CTTGCATGTG TAAAACATCA GGATATGTCC GGCTCTAATA TGGGCGATGA TCACAAAGAA TATTTCTCTG GAGAGCAGGC GCTGAAAGCT TCTGGTGAAA ATAATACGAT GAGTCAATTT TCATAA
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Protein sequence | MNYNTEKTNA SNVIAQQGDA WKAINPEYVA RLRSQNRFKT GIDIAKYTAK IMREDMDSYD IDSKNYTQSL GCWHGFVGQQ KMISIKKHFT TTKGTYLYLS GWMVAAMRSE FGPLPDQSMH EKTSVPLLIE ELYTFLKQAD ARELGHVFQE LDAANDKGDQ VAAQAALKKI NEFETHVVPI IADIDAGFGN EEATYLLAKK MIEAGACCIQ IENQVSDAKQ CGHQDGKVTV PHEDFLAKIN AVRYAFMELG VDDGVIVART DSLGAGLTQK IPVSQEPGDL ADQYNNYIDG EVINSLDQLK SGDLVLSRGG ELIIPNRLAN GLVRFKPDTG EDRVVLDCIT SLQNGADLLW IETEQPNVGQ IAGMVNRIRE AVPNAKLVYN NSPSFNWTLS FRQQIFDTWN KDGIDVSAYN RADLMSPIYD ETKLALEADQ QIQNFQKDAA REAGIFHHLI TLPTYHTAAL STDNLAKDYF GEMGMLAYVK NVQREEIRQG LACVKHQDMS GSNMGDDHKE YFSGEQALKA SGENNTMSQF S
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