Gene Ping_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0291 
Symbol 
ID4623710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp378925 
End bp379974 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content42% 
IMG OID639795488 
ProductABC transporter binding protein inner membrane protein 
Protein accessionYP_941756 
Protein GI119944076 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAT TAAACACATG GCAAGAGATG CGCAACAATC CGGTGAATGT GGATCGCTGG 
TTGCAGTTCA AAAATAATAA ACGCGGTTAT TGGTCGCTGT GGATCTTTTT AATCTTATTT
TTAGCCAGTT TGCTGGGTGA ACTGTGGATA AATGATAAAC CTATTATGGT TTCTTACCAG
CAGCATTGGT ATTTCCCCCT TGTTGAGGAT ATTCCTGAGA ATCAACTCGG GGGTGATTTT
GATATCACCA CGGATTTTAG TGATCCTTAT ATGGTGACGC AAATTAACAA AGCGGGCTGG
ATTATCTGGC CGCTGATCCC TTTTTATTTT GATAGTATTA ATTTTGAATT AACCGAACCG
GCACCCTCAC CACCCAGTGA TATTAACTAT CTGGGAACCG ATGACCAGGG ACGGGATGTT
TTGGCGCGTT TGGTTTATGG ATTTAGAATT TCTGTCTTTT TTGCGTTAGC GTTAACCTTA
GTCAGCTCAG TTATTGGTAT TATTGTCGGT GCTGTTCAGG GGTATTACGG CGGACGAATA
GATCTGTTCG GGCAGCGTTT TTTAGAAATT TGGGAAGGTC TGCCGATGTT ATTTATGCTG
ATTATTTTAG CCAGTTTTGT GGAGCCTACT TTTCTGTGGT TATTAGGTCT GATGATTCTT
TTTAGCTGGC CAAGTTTAGT GGGTGTGGTG CGTGCGGAGT TTTTACGCGG GCGGCACTTA
GAATATGTTA AAGCCGCCCG CGCTTTGGGC GTTGGCGATA AAAAAATCAT GTTTAAACAT
ATTTTACCCA ATGCCATGAT TGCAACCTTA ACTTTTATGC CTTATCTATT TACCGGGGCT
TTAACCACGT TAACCTCCTT AGATTTCCTC GGTTTTGGTT TACCTTTGGG TTCTGCATCA
TTAGGTGAGA TGGTCGCTCA GGGAAAAGAC AACCTGCATG CCCCCTGGCT TGCTATTACT
GCATTTATTT CATTATCTAC TATTTTGGTC TTATTAGTTT TTATCGGAGA AGCAACGCGT
GATGCATTTG ATCCAAGGAG ATCCTTGTGA
 
Protein sequence
MSLLNTWQEM RNNPVNVDRW LQFKNNKRGY WSLWIFLILF LASLLGELWI NDKPIMVSYQ 
QHWYFPLVED IPENQLGGDF DITTDFSDPY MVTQINKAGW IIWPLIPFYF DSINFELTEP
APSPPSDINY LGTDDQGRDV LARLVYGFRI SVFFALALTL VSSVIGIIVG AVQGYYGGRI
DLFGQRFLEI WEGLPMLFML IILASFVEPT FLWLLGLMIL FSWPSLVGVV RAEFLRGRHL
EYVKAARALG VGDKKIMFKH ILPNAMIATL TFMPYLFTGA LTTLTSLDFL GFGLPLGSAS
LGEMVAQGKD NLHAPWLAIT AFISLSTILV LLVFIGEATR DAFDPRRSL