Gene Ping_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0218 
Symbol 
ID4627156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp273270 
End bp274334 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content42% 
IMG OID639795407 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase 
Protein accessionYP_941684 
Protein GI119944004 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.724108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA CTAATACTTC TCTCAAGGCT TTTAATACTT TTTCTATTGA TGTTAACGCA 
CAAATATTAT TTCATTTTAA CAATCTTAAA CAGATTCCCG AACTGTTAGA CTTGGTGAAA
ACTACCCGCG CGGACAATAA GCCTGTCTTA ATTTTAGGCG GCGGCAGTAA TATATTGTTC
TGTGAAGATT TTACAGGCTT AGTGATTAAG GTTGATTTGT CGGGCGTTGA TATAACTGAA
TCTGCTGATA GTTATTTATT AAAAGTCGCA GCGGGGGAGA ACTGGCATAA GTTAGTCGCC
GACTGTATTG ATAAAGGCAT CAATGGATTG GAAAACTTAG CCTTGATCCC AGGGGTTGTT
GGCGCCGCAC CGGTGCAAAA TATCGGTGCC TATGGCACAG AATTTAAAGA TTTTTGTGAG
TCGGTTGAAT ATCTTGATTT GAATTCGGGC GCATTACATT GTTTGAGCGC CAAAGAGTGT
TTATTTGCCT ACCGTGACAG TATTTTTAAA ACACTAAAAA TGCAGGATGC ATTAATCACC
AGAGTAACCC TTAAATTGAC TAAGGACTGG CAAGCGCAGA ATCAATATGG CCGTTTGAAA
AATGCAGCCG AATCGGCTCA AAAACTGAGT GCAAAACAGA TTTTTACCTC TGTCTGTCAA
ATTCGCAGTG AAAAATTACC CGATCCCGCC AAGTTGGGTA ATGCAGGCAG TTTTTTTAAA
AATCCATTAG TAACAGCGCC GCAAGCAGAG CAGTTACTGG CTTTATATCC GCATATGCCC
CATTACCCGC AGCCGGATGG GCAAGTAAAA TTAGCGGCAG GGTGGCTTAT CGAGCAGGCC
AATCTAAAAG GCGCTCATAT TGGTGGTGCG GCTGTGCATC AGCAGCAAGC CTTGGTATTA
ATTAACCAAA ACAATGCCTG CGCTGCAGAT GTTATTCAAT TGGCAAATTT AGTGCGGACA
ACAGTAAAAG AAAAATTTAA TATAAACTTA GAACACGAAG TGCGCTTTAT CTGCGCGATG
GGCGAGAGCA ACTTAACAGA GGCGGTTAAC AAATGTCGGA ACTGA
 
Protein sequence
MIETNTSLKA FNTFSIDVNA QILFHFNNLK QIPELLDLVK TTRADNKPVL ILGGGSNILF 
CEDFTGLVIK VDLSGVDITE SADSYLLKVA AGENWHKLVA DCIDKGINGL ENLALIPGVV
GAAPVQNIGA YGTEFKDFCE SVEYLDLNSG ALHCLSAKEC LFAYRDSIFK TLKMQDALIT
RVTLKLTKDW QAQNQYGRLK NAAESAQKLS AKQIFTSVCQ IRSEKLPDPA KLGNAGSFFK
NPLVTAPQAE QLLALYPHMP HYPQPDGQVK LAAGWLIEQA NLKGAHIGGA AVHQQQALVL
INQNNACAAD VIQLANLVRT TVKEKFNINL EHEVRFICAM GESNLTEAVN KCRN