Gene Ping_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0215 
Symbol 
ID4627153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp269538 
End bp270185 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content41% 
IMG OID639795404 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_941681 
Protein GI119944001 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.755925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATA ACAGCATGAA AATTATAGTT ATACCCGTTA CTCCCTATCA GCAAAACTGC 
AGTCTGATTA TTTGTGAGGA AACAAAAATT GCCGCCATCG TTGATCCCGG GGGCGATCCG
TTGCGTATTT TAAATATTGT TGAAAAACAA GGTGTTAAAG TTGATAAAAT TATATTAACT
CATGGTCATT TAGACCATGT CGGTGGCACT CAGGCCGTTG CTGGCAAATT GAATGTACCA
GTGATCGGCC CAGAAAAAGA AGATCTATTC TGGTTAGAGC AATTAGAAGC GCAAAGTCGG
CGTTTTGGTT TACCCACAAC GGAAAGTTTT TCTCCAAACC GATGGTTGAC AGAAGGAGAA
GTGCTGGAAG TCGGTAAAAT AAAACTAAAA GTACTGCGTA TACCAGGCCA TACACCTGGC
CATATTGCCC TGTATGATAA GCAAAGCAAA CAGGTTATTG TTGGTGATAT CTTATTCAAC
GGCGGCATTG GTCGTTTTGA TTTCCCGCGT GGTAATCGCT CCTTACTTGT CAGTGGCATT
AAAGAAAAAT TATTAACACT ACCGCCTGAA ACAACGGTTT ATCCGGGGCA TGGACCCACT
ACTACTATTG GCAAAGAGAA AGCAAGCAAT CCTTTTTTAC GTTTGTAA
 
Protein sequence
MSNNSMKIIV IPVTPYQQNC SLIICEETKI AAIVDPGGDP LRILNIVEKQ GVKVDKIILT 
HGHLDHVGGT QAVAGKLNVP VIGPEKEDLF WLEQLEAQSR RFGLPTTESF SPNRWLTEGE
VLEVGKIKLK VLRIPGHTPG HIALYDKQSK QVIVGDILFN GGIGRFDFPR GNRSLLVSGI
KEKLLTLPPE TTVYPGHGPT TTIGKEKASN PFLRL