Gene Ping_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0179 
Symbol 
ID4626824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp227769 
End bp228338 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content40% 
IMG OID639795369 
ProductSH3 type 3 domain-containing protein 
Protein accessionYP_941646 
Protein GI119943966 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTGCA TGAATGCGAC TGCAGAAACC CGCTATGTGA GTGATGATAT TTTCATTTAT 
ATGCATTCGG GACCAAGCCG GGAATATCGT ATTATCGGCA CACTTGACGT GGGCAGTCCG
GTCACAACTT TAACATATAA TAAAAAGACA GGTTTTTATC AAGTAAAAAC TGCTAATGGT
AAAACCGCCT GGGTAAAAGG CGATCAGTTA CAAACGACTT TACCAGCAAA AAATTTGCTA
CCTGCAATCC AAAAAGAGCT CCAAGAAGCA CAAATAAAAC TACAAAATAT TGATCAGAAA
AACAGTGAGA TATTGAATCA ACAAAAGCAA TCAATCATTG ATAAAGACAA CTTGATCGCA
GCGCTAGAGA ATGAGAAAAA CAGCTTGCAG GAAAACATCA TCGAGCTTAA AGCCACTAAT
CTGGAACTCG ACTTGTTGCA GGATACCAAG GACGAACGGG TTAAAATGGA ATGGATGTTG
TATGGAGGCA GTGTGCTATT TTTTGGATTG CTGTGTGGTT TGCTGATCCC TTCGTTACCA
CGCCGTAAGA AAAACAACAA TAATTGGTAA
 
Protein sequence
MLCMNATAET RYVSDDIFIY MHSGPSREYR IIGTLDVGSP VTTLTYNKKT GFYQVKTANG 
KTAWVKGDQL QTTLPAKNLL PAIQKELQEA QIKLQNIDQK NSEILNQQKQ SIIDKDNLIA
ALENEKNSLQ ENIIELKATN LELDLLQDTK DERVKMEWML YGGSVLFFGL LCGLLIPSLP
RRKKNNNNW